C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: pre-B-cell leukemia homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000498497 PBX1-010 ENSG00000185630 9606 + 1:164559823-164684965 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000498497
Transcript ID Muscle
ENST00000498497 2.069±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007M6 CIL_0007M6_0001 UCNEbase 1:164054328-164712505
CIL_0007US CIL_0007US_0001 VISTA 1:164334904-164936237
CIL_0008NA CIL_0008NA_0001 VISTA 1:164350801-164951927
CIL_0009AB CIL_0009AB_0001 VISTA 1:164368338-164969800
CIL_00096W CIL_00096W_0001 VISTA 1:164399355-165000586
CIL_00089R CIL_00089R_0001 VISTA 1:164403550-165004969
CIL_0008FU CIL_0008FU_0001 VISTA 1:164431022-165032285
CIL_00094F CIL_00094F_0001 VISTA 1:164536270-165137557

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072863 Pbx1-201 protein_coding Mus_musculus 0 464
ENSMUST00000176482 Pbx1-006 retained_intron Mus_musculus 0 464
ENSMUST00000064438 Pbx1-005 protein_coding Mus_musculus 0 464
ENSMUST00000176790 Pbx1-004 protein_coding Mus_musculus 0 464
ENSMUST00000176540 Pbx1-002 protein_coding Mus_musculus 0 464
ENSMUST00000188912 Pbx1-001 protein_coding Mus_musculus 0 464
ENSMUST00000176791 Pbx1-007 retained_intron Mus_musculus 0 462

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