C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin, gamma complex associated protein 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000498611 TUBGCP6-002 ENSG00000128159 9606 - 22:50217689-50244992 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungOvaryTestisENST00000498611
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Ovary Testis
ENST00000498611 0.893±0.00 1.642±0.00 0.509±0.00 0.982±0.00 1.072±0.00 0.555±0.34 0.674±0.00 0.533±0.00 1.833±0.00 1.291±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000097 CIL_000097_0001 CGP 22:50200979-50244992
CIL_000096 CIL_000096_0001 CGP 22:50217689-50251405

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041656 Tubgcp6-003 protein_coding Mus_musculus 0 870
ENSMUST00000109353 Tubgcp6-001 protein_coding Mus_musculus 0 870
ENSMUST00000166480 Tubgcp6-011 nonsense_mediated_decay Mus_musculus 0 730
ENSMUST00000163290 Tubgcp6-005 nonsense_mediated_decay Mus_musculus 0 656
ENSMUST00000168256 Tubgcp6-007 retained_intron Mus_musculus 0 641
ENSMUST00000169208 Tubgcp6-009 retained_intron Mus_musculus 0 477
ENSMUST00000166994 Tubgcp6-010 retained_intron Mus_musculus 0 390
ENSDART00000122952 TUBGCP6-201 protein_coding Danio_rerio 0 241
ENSMUST00000164717 Tubgcp6-006 retained_intron Mus_musculus 6e-32 145

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