C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase type 13A2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000502418 ATP13A2-007 ENSG00000159363 9606 - 1:16985981-16990003 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000502418
Transcript ID Brain Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000502418 27.306±0.00 3.872±0.00 1.283±0.00 7.618±0.00 1.789±0.00 4.502±0.00 17.661±0.00 11.786±0.00 4.482±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000235 CIL_000235_0002 CGP 1:16985958-17054170

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000127833 Atp13a2-004 protein_coding Mus_musculus 0 837
ENSMUST00000037055 Atp13a2-001 protein_coding Mus_musculus 0 837
ENSMUST00000137630 Atp13a2-007 retained_intron Mus_musculus 0 701
ENSMUST00000151517 Atp13a2-002 retained_intron Mus_musculus 0 654
ENSMUST00000168047 Atp13a2-008 protein_coding Mus_musculus 0 289

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