C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | protocadherin alpha 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000504120  |
PCDHA1-002 |
ENSG00000204970 |
9606 | + |
5:140786291-141012347  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005509 | IEA | calcium ion binding |
| GO:0005576 | IEA | extracellular region |
| GO:0005886 | IDA | plasma membrane |
| GO:0005887 | TAS | integral component of plasma membrane |
| GO:0007155 | TAS | cell adhesion |
| GO:0007156 | IEA | homophilic cell adhesion via plasma membrane adhesion molecules |
| GO:0007399 | TAS | nervous system development |
| GO:0016020 | IEA | membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000070797
|
Pcdha10-204 | protein_coding | Mus_musculus | 0 | 5421 |
|
ENSMUST00000047614
|
Pcdha10-203 | protein_coding | Mus_musculus | 0 | 4706 |
|
ENSMUST00000115662
|
Pcdha10-209 | protein_coding | Mus_musculus | 0 | 4636 |
|
ENSMUST00000115658
|
Pcdha10-206 | protein_coding | Mus_musculus | 0 | 4505 |
|
ENSMUST00000115657
|
Pcdha10-205 | protein_coding | Mus_musculus | 0 | 4218 |
|
ENSMUST00000115659
|
Pcdha10-207 | protein_coding | Mus_musculus | 0 | 4198 |
|
ENSMUST00000047479
|
Pcdha10-202 | protein_coding | Mus_musculus | 0 | 3354 |
|
ENSMUST00000007584
|
Pcdha10-201 | protein_coding | Mus_musculus | 0 | 3354 |
|
ENSMUST00000115661
|
Pcdha10-208 | protein_coding | Mus_musculus | 0 | 939 |
