C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cadherin 6, type 2, K-cadherin (fetal kidney)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000504835 CDH6-005 ENSG00000113361 9606 + 5:31316250-31319042 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyMusclePlacentaTestisENST00000504835
Transcript ID Kidney Muscle Placenta Testis
ENST00000504835 5.211±0.00 0.119±0.00 0.076±0.00 0.043±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MJ CIL_0006MJ_0003 CGP 5:26880600-31329146
CIL_0008PA CIL_0008PA_0001 VISTA 5:30691085-31296140
CIL_0008DF CIL_0008DF_0001 VISTA 5:30694176-31295940

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036439 Cdh6-201 protein_coding Mus_musculus 0 643

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