C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008DF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1312 VISTA 9606 5:30694176-31295940
GeneTranscriptPositionBiotype
ENSG00000113361 (CDH6)
cadherin 6, type 2, K-cadherin (fetal kidney) 		ENST00000265071 (CDH6-001) 31193750-31329146 protein_coding
ENST00000504835 (CDH6-005) 31316250-31319042 retained_intron
ENST00000506396 (CDH6-002) 31193769-31251854 retained_intron
ENST00000508132 (CDH6-004) 31294199-31302442 retained_intron
ENST00000514738 (CDH6-003) 31193750-31318346 protein_coding
ENSG00000241668 (RPL19P11)
ribosomal protein L19 pseudogene 11 		ENST00000495944 (RPL19P11-001) 31053565-31054153 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0008DF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1312 VISTA 10090 15:13092550-13694271
GeneTranscriptPositionBiotype
ENSMUSG00000039385 (Cdh6)
cadherin 6 		ENSMUST00000036439 (Cdh6-201) 13034200-13173639 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008DF_0001ENSG00000113361ENST00000265071ENST00000504835ENST00000506396ENST00000508132ENST00000514738ENSG00000241668ENST00000495944CIL_0008DF_0002ENSMUSG00000039385ENSMUST00000036439
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008DF_0001ENSG00000113361ENST00000265071ENST00000504835ENST00000514738ENSG00000241668ENST00000495944CIL_0008DF_0002ENSMUSG00000039385ENSMUST00000036439
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000113361 ENST00000265071 0.632±0.00 0.538±0.00 2.355±0.00 1.165±0.25 1.003±0.51 0.478±0.20 0.460±0.00 2.033±1.99 0.690±0.62 0.996±0.31 0.177±0.09 0.882±0.35 0.449±0.32 0.580±0.54
ENST00000504835 N/A N/A N/A N/A N/A N/A N/A 5.211±0.00 N/A N/A 0.119±0.00 N/A 0.076±0.00 0.043±0.00
ENST00000506396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514738 0.790±0.00 0.551±0.00 N/A 1.377±0.00 0.512±0.00 0.546±0.00 0.344±0.01 0.102±0.00 N/A 0.448±0.00 N/A 0.494±0.00 0.593±0.38 0.076±0.00
ENSG00000241668 ENST00000495944 0.085±0.00 0.186±0.00 N/A N/A 0.065±0.00 0.118±0.00 0.028±0.00 0.032±0.00 N/A 0.062±0.00 0.054±0.00 N/A N/A 0.167±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039385 ENSMUST00000036439 0.302±0.25 2.292±1.14 N/A 1.111±0.00 0.062±0.03 0.424±0.10 0.117±0.04 1.327±0.77 0.036±0.02 0.353±0.06 0.027±0.01 0.511±0.13 0.144±0.08 0.054±0.04

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