C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | speckle-type POZ protein | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000504889  |
SPOP-023 |
ENSG00000121067 |
9606 | - |
17:49607068-49611318  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000877 | CIL_000877_0001 | VISTA | 17:49438854-50041456 |
| CIL_0009BV | CIL_0009BV_0001 | VISTA | 17:49438877-50041441 |
| CIL_0007QJ | CIL_0007QJ_0001 | VISTA | 17:49459872-50061823 |
| CIL_0004N3 | CIL_0004N3_0002 | CGP | 17:49575858-49678234 |
| CIL_0004N2 | CIL_0004N2_0002 | CGP | 17:49598884-49709014 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000107724
|
Spop-002 | protein_coding | Mus_musculus | 0 | 278 |
|
ENSMUST00000107722
|
Spop-001 | protein_coding | Mus_musculus | 0 | 278 |
|
ENSDART00000129143
|
spopla-201 | protein_coding | Danio_rerio | 8e-40 | 167 |
|
ENSDART00000011922
|
spopla-001 | protein_coding | Danio_rerio | 8e-40 | 167 |
|
ENSMUST00000075953
|
Tdpoz4-201 | protein_coding | Mus_musculus | 1e-37 | 159 |
|
ENSMUST00000098879
|
Tdpoz5-201 | protein_coding | Mus_musculus | 8e-35 | 150 |
|
ENSMUST00000091692
|
Gm10697-201 | protein_coding | Mus_musculus | 8e-35 | 150 |
|
ENSMUST00000150922
|
Spop-005 | processed_transcript | Mus_musculus | 2e-31 | 139 |
