C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | speckle-type POZ protein | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000150922  |
Spop-005 |
ENSMUSG00000057522 |
10090 | + |
11:95474319-95490315  |
processed_transcript |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007QJ | CIL_0007QJ_0002 | VISTA | 11:95039208-95641127 |
| CIL_000877 | CIL_000877_0002 | VISTA | 11:95055809-95658196 |
| CIL_0009BV | CIL_0009BV_0002 | VISTA | 11:95055825-95658170 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000011922
|
spopla-001 | protein_coding | Danio_rerio | 0 | 222 |
|
ENSDART00000129143
|
spopla-201 | protein_coding | Danio_rerio | 0 | 200 |
|
ENST00000347630
|
SPOP-201 | protein_coding | Homo_sapiens | 0 | 599 |
|
ENST00000393328
|
SPOP-001 | protein_coding | Homo_sapiens | 0 | 599 |
|
ENST00000503676
|
SPOP-007 | protein_coding | Homo_sapiens | 0 | 599 |
|
ENST00000504102
|
SPOP-005 | protein_coding | Homo_sapiens | 0 | 599 |
|
ENST00000504889
|
SPOP-023 | retained_intron | Homo_sapiens | 2e-31 | 139 |
|
ENST00000505581
|
SPOP-011 | protein_coding | Homo_sapiens | 0 | 599 |
|
ENST00000506399
|
SPOP-015 | nonsense_mediated_decay | Homo_sapiens | 0 | 436 |
|
ENST00000507970
|
SPOP-013 | protein_coding | Homo_sapiens | 0 | 383 |
|
ENST00000509079
|
SPOP-012 | protein_coding | Homo_sapiens | 0 | 599 |
|
ENST00000509869
|
SPOP-022 | nonsense_mediated_decay | Homo_sapiens | 0 | 320 |
|
ENST00000514121
|
SPOP-009 | protein_coding | Homo_sapiens | 0 | 193 |
|
ENST00000515508
|
SPOP-020 | protein_coding | Homo_sapiens | 7e-22 | 108 |
