C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: speckle-type POZ protein-like a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000011922 spopla-001 ENSDARG00000010563 7955 - 9:10275670-10292784 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000011922
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000011922 10.755±3.59 2.306±2.13 7.075±0.00 0.530±0.00 1.034±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000QJ CIL_0000QJ_0001 CGP 9:10239597-10292784
CIL_0000QI CIL_0000QI_0001 CGP 9:10275670-10370660

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0016567 IEA protein ubiquitination
GO:0031397 ISS negative regulation of protein ubiquitination
GO:0031463 ISS Cul3-RING ubiquitin ligase complex
GO:0043161 ISS proteasome-mediated ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075953 Tdpoz4-201 protein_coding Mus_musculus 5e-21 106
ENSMUST00000091692 Gm10697-201 protein_coding Mus_musculus 0.0000000000003 81
ENSMUST00000098879 Tdpoz5-201 protein_coding Mus_musculus 0.0000000000003 81
ENSMUST00000107722 Spop-001 protein_coding Mus_musculus 0 527
ENSMUST00000107724 Spop-002 protein_coding Mus_musculus 0 527
ENSMUST00000150922 Spop-005 processed_transcript Mus_musculus 0 222
ENST00000347630 SPOP-201 protein_coding Homo_sapiens 0 627
ENST00000393328 SPOP-001 protein_coding Homo_sapiens 0 627
ENST00000503676 SPOP-007 protein_coding Homo_sapiens 0 627
ENST00000504102 SPOP-005 protein_coding Homo_sapiens 0 627
ENST00000504889 SPOP-023 retained_intron Homo_sapiens 8e-40 167
ENST00000505581 SPOP-011 protein_coding Homo_sapiens 0 444
ENST00000506559 RP13-644M16.1-001 processed_pseudogene Homo_sapiens 0 329
ENST00000507551 SPOP-024 retained_intron Homo_sapiens 5e-21 106
ENST00000509079 SPOP-012 protein_coding Homo_sapiens 0 508
ENST00000509604 RP11-468N14.11-001 processed_pseudogene Homo_sapiens 0 239
ENST00000509869 SPOP-022 nonsense_mediated_decay Homo_sapiens 0 237
ENST00000577134 SPOP-026 retained_intron Homo_sapiens 2e-21 106

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