C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | tripartite motif containing 23 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000505205  |
TRIM23-005 |
ENSG00000113595 |
9606 | - |
5:65611670-65624360  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007G9 | CIL_0007G9_0002 | CGP | 5:65563236-65625975 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IEA | protein binding |
| GO:0008270 | IEA | zinc ion binding |
| GO:0046872 | IEA | metal ion binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000022225
|
Trim23-001 | protein_coding | Mus_musculus | 0 | 472 |
|
ENSMUST00000069187
|
Trim23-002 | protein_coding | Mus_musculus | 0 | 451 |
|
ENSMUST00000069174
|
Trim23-004 | protein_coding | Mus_musculus | 0 | 342 |
|
ENSMUST00000160230
|
Trim23-003 | nonsense_mediated_decay | Mus_musculus | 0 | 316 |
|
ENSDART00000127581
|
trim23-001 | protein_coding | Danio_rerio | 1e-21 | 108 |
