C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007G9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000063161-ENSDARG00000069420 CGP 7955 10:11733687-11806249
GeneTranscriptPositionBiotype
ENSDARG00000063161 (ppwd1)
peptidylprolyl isomerase domain and WD repeat containing 1 		ENSDART00000092047 (ppwd1-001) 11733687-11754461 protein_coding
ENSDARG00000069420 (trim23)
tripartite motif containing 23 		ENSDART00000101032 (trim23-201) 11756201-11806249 protein_coding
ENSDART00000127581 (trim23-001) 11756777-11806249 protein_coding
CIL_0007G9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000113593-ENSG00000113595 CGP 9606 5:65563236-65625975
GeneTranscriptPositionBiotype
ENSG00000113593 (PPWD1)
peptidylprolyl isomerase domain and WD repeat containing 1 		ENST00000261308 (PPWD1-001) 65563239-65587549 protein_coding
ENST00000502703 (PPWD1-009) 65563867-65571927 protein_coding
ENST00000503435 (PPWD1-006) 65563290-65569971 nonsense_mediated_decay
ENST00000505380 (PPWD1-010) 65563888-65572284 protein_coding
ENST00000507608 (PPWD1-011) 65569363-65576926 retained_intron
ENST00000508982 (PPWD1-005) 65563236-65568079 retained_intron
ENST00000510930 (PPWD1-002) 65563296-65587422 nonsense_mediated_decay
ENST00000511334 (PPWD1-013) 65576952-65583291 retained_intron
ENST00000511908 (PPWD1-003) 65563299-65587527 nonsense_mediated_decay
ENST00000513773 (PPWD1-015) 65582556-65587278 retained_intron
ENST00000514172 (PPWD1-012) 65572086-65583112 nonsense_mediated_decay
ENST00000515151 (PPWD1-014) 65579296-65585047 retained_intron
ENST00000515447 (PPWD1-008) 65563293-65571884 nonsense_mediated_decay
ENST00000535264 (PPWD1-201) 65563239-65587541 protein_coding
ENST00000538977 (PPWD1-202) 65563239-65587541 protein_coding
ENSG00000113595 (TRIM23)
tripartite motif containing 23 		ENST00000231524 (TRIM23-001) 65589680-65624646 protein_coding
ENST00000274327 (TRIM23-002) 65590176-65624299 protein_coding
ENST00000381018 (TRIM23-003) 65590176-65624296 protein_coding
ENST00000505205 (TRIM23-005) 65611670-65624360 nonsense_mediated_decay
ENST00000506400 (TRIM23-006) 65610862-65624320 nonsense_mediated_decay
ENST00000508808 (TRIM23-007) 65606916-65610874 processed_transcript
ENST00000513794 (TRIM23-004) 65618232-65625975 protein_coding
ENSG00000113597 (TRAPPC13)
trafficking protein particle complex 13 		ENST00000231526 (TRAPPC13-003) 65625040-65666069 protein_coding
ENST00000399438 (TRAPPC13-001) 65624716-65666233 protein_coding
ENST00000415825 (TRAPPC13-012) 65664119-65664766 retained_intron
ENST00000438419 (TRAPPC13-004) 65625034-65664764 protein_coding
ENST00000504243 (TRAPPC13-009) 65635340-65660813 nonsense_mediated_decay
ENST00000504751 (TRAPPC13-008) 65625045-65658482 nonsense_mediated_decay
ENST00000505108 (TRAPPC13-011) 65661716-65664764 retained_intron
ENST00000505553 (TRAPPC13-002) 65625045-65664766 protein_coding
ENST00000508304 (TRAPPC13-013) 65625069-65652736 retained_intron
ENST00000509234 (TRAPPC13-010) 65657971-65664381 retained_intron
ENST00000512009 (TRAPPC13-005) 65625004-65666074 retained_intron
ENST00000520525 (TRAPPC13-014) 65655634-65661087 retained_intron
ENSG00000207352 (RNU6-540P)
RNA, U6 small nuclear 540, pseudogene 		ENST00000384622 (RNU6-540P-201) 65604661-65604761 snRNA
ENSG00000253251 (CTC-534A2.2)
CDNA FLJ26957 fis, clone SLV00486 {ECO:0000313|EMBL:BAC85360.1}; Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000424007} 		ENST00000510585 (CTC-534A2.2-001) 65624765-65630891 protein_coding
ENST00000514404 (CTC-534A2.2-002) 65626009-65629601 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007G9_0001ENSDARG00000063161ENSDART00000092047ENSDARG00000069420ENSDART00000101032ENSDART00000127581CIL_0007G9_0002ENSG00000113593ENST00000261308ENST00000502703ENST00000503435ENST00000505380ENST00000507608ENST00000508982ENST00000510930ENST00000511334ENST00000511908ENST00000513773ENST00000514172ENST00000515151ENST00000515447ENST00000535264ENST00000538977ENSG00000113595ENST00000231524ENST00000274327ENST00000381018ENST00000505205ENST00000506400ENST00000508808ENST00000513794ENSG00000113597ENST00000231526ENST00000399438ENST00000415825ENST00000438419ENST00000504243ENST00000504751ENST00000505108ENST00000505553ENST00000508304ENST00000509234ENST00000512009ENST00000520525ENSG00000207352ENST00000384622ENSG00000253251ENST00000510585ENST00000514404
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007G9_0001ENSDARG00000063161ENSDART00000092047ENSDARG00000069420ENSDART00000101032ENSDART00000127581CIL_0007G9_0002ENSG00000113593ENST00000261308ENST00000503435ENST00000505380ENST00000508982ENST00000510930ENST00000511334ENST00000511908ENST00000513773ENST00000514172ENSG00000113595ENST00000231524ENST00000274327ENST00000381018ENSG00000113597ENST00000231526ENST00000399438ENST00000438419ENST00000504243ENST00000505553ENST00000512009ENSG00000207352ENST00000384622ENSG00000253251ENST00000510585
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000063161 ENSDART00000092047 N/A N/A N/A 2.444±0.00 N/A N/A 6.407±0.12 2.854±3.31 0.183±0.00 N/A 1.660±0.00 N/A N/A N/A
ENSDARG00000069420 ENSDART00000101032 N/A N/A N/A N/A N/A N/A 1.334±0.00 N/A 0.164±0.00 N/A 0.380±0.00 N/A N/A N/A
ENSDART00000127581 N/A N/A N/A 13.749±8.81 N/A N/A 1.918±0.63 N/A 0.411±0.00 N/A 1.660±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000113593 ENST00000261308 N/A N/A 1.371±0.00 2.276±0.00 1.722±0.39 2.048±0.21 1.138±0.12 1.727±0.40 3.696±0.00 3.650±0.00 N/A 5.947±2.67 4.374±0.38 7.395±5.87
ENST00000502703 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.371±0.00 N/A N/A N/A
ENST00000505380 N/A N/A N/A 3.410±0.00 N/A 5.054±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508982 N/A N/A N/A 2.720±0.00 4.733±0.00 4.285±0.00 1.802±0.00 2.221±0.00 3.645±0.00 6.666±0.00 1.054±0.00 5.775±0.00 N/A N/A
ENST00000510930 1.888±0.00 3.126±0.00 N/A 1.438±0.00 3.079±0.00 3.286±0.00 1.532±0.00 1.753±0.00 1.190±0.00 0.804±0.00 N/A 5.566±0.00 6.069±0.00 6.114±1.31
ENST00000511334 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.579±0.00 N/A N/A N/A
ENST00000511908 3.084±0.00 3.626±0.00 N/A N/A 1.180±0.00 N/A 0.874±0.00 1.941±0.00 N/A 1.927±0.00 2.173±0.00 4.772±0.00 N/A 1.113±0.00
ENST00000513773 N/A 3.990±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514172 N/A N/A N/A N/A N/A N/A N/A 2.642±0.00 N/A N/A N/A 6.957±0.00 7.046±0.00 13.446±0.00
ENST00000515151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000113595 ENST00000231524 1.788±0.00 N/A N/A 7.956±1.24 1.279±0.28 2.188±1.48 1.542±0.73 1.564±1.18 0.979±0.35 1.656±0.50 2.066±0.97 1.860±0.14 0.809±0.16 5.306±0.00
ENST00000274327 1.119±0.00 N/A 1.118±0.00 N/A 0.783±0.00 0.755±0.00 0.838±0.00 N/A N/A 1.692±0.00 N/A 1.135±0.82 N/A N/A
ENST00000381018 N/A N/A N/A 6.869±1.09 N/A 1.045±0.00 1.396±0.23 1.017±0.00 3.480±0.00 N/A 1.478±0.00 0.883±0.40 2.003±0.00 6.451±0.00
ENST00000505205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000113597 ENST00000231526 1.740±0.00 3.247±0.00 N/A 6.884±0.00 2.481±0.00 2.558±0.00 1.619±0.91 3.173±2.04 1.641±0.17 1.688±0.04 0.988±0.36 1.915±0.71 1.509±0.39 2.502±0.72
ENST00000399438 N/A N/A N/A N/A 1.432±0.00 N/A 0.498±0.00 N/A N/A N/A N/A 0.754±0.12 0.504±0.00 N/A
ENST00000415825 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438419 N/A N/A N/A N/A 2.546±0.00 2.284±0.00 2.718±0.00 N/A 1.988±0.00 2.937±0.00 N/A 2.847±0.00 1.216±0.04 3.175±0.00
ENST00000504243 N/A N/A N/A N/A N/A N/A N/A 3.216±0.00 N/A N/A 1.364±0.00 N/A N/A N/A
ENST00000504751 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505108 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505553 N/A N/A 1.940±0.00 N/A N/A N/A N/A N/A N/A N/A 1.353±0.00 N/A N/A N/A
ENST00000508304 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512009 N/A 0.768±0.00 N/A N/A 0.896±0.00 0.682±0.00 0.319±0.00 N/A 0.787±0.00 N/A N/A 0.433±0.18 N/A N/A
ENST00000520525 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000207352 ENST00000384622 N/A 0.435±0.00 N/A N/A N/A N/A N/A N/A N/A 0.976±0.00 N/A N/A N/A N/A
ENSG00000253251 ENST00000510585 N/A N/A 0.770±0.00 N/A 1.944±0.00 1.686±0.00 N/A N/A N/A 2.331±0.00 0.698±0.00 N/A N/A N/A
ENST00000514404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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