C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000506122 RP11-241J12.3-001 ENSG00000248967 9606 - 5:80746339-80746819 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastKidneyLungMuscleOvaryTestisENST00000506122
Transcript ID Brain Breast Kidney Lung Muscle Ovary Testis
ENST00000506122 0.051±0.00 0.281±0.23 0.077±0.00 0.806±0.00 0.045±0.00 0.108±0.01 0.080±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037324 Skp1a-001 protein_coding Mus_musculus 0 444
ENSMUST00000109072 Skp1a-002 protein_coding Mus_musculus 0 442
ENSMUST00000116595 Skp1a-005 nonsense_mediated_decay Mus_musculus 0 363
ENSMUST00000119054 Gm12988-001 processed_pseudogene Mus_musculus 0 348
ENSMUST00000147684 Skp1a-004 nonsense_mediated_decay Mus_musculus 0 305
ENSMUST00000166537 Skp1a-006 protein_coding Mus_musculus 8e-31 137
ENSMUST00000093121 Skp1a-003 retained_intron Mus_musculus 2e-16 90

Loading