C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NOP2/Sun RNA methyltransferase family, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000506139 NSUN2-004 ENSG00000037474 9606 - 5:6599569-6633042 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000506139
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000506139 4.924±0.00 7.991±0.00 3.875±0.00 2.743±0.00 3.750±0.00 3.613±0.00 2.420±0.00 1.591±0.01 3.953±2.75 16.058±15.20 5.973±5.85 13.166±10.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00048P CIL_00048P_0001 CGP 5:6599239-6669562

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000049 IEA tRNA binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0007067 IEA mitotic nuclear division
GO:0008168 IEA methyltransferase activity
GO:0016428 IDA tRNA (cytosine-5-)-methyltransferase activity
GO:0030488 IDA tRNA methylation
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000176485 Nsun2-008 protein_coding Mus_musculus 0 2089
ENSMUST00000022087 Nsun2-002 protein_coding Mus_musculus 0 1849
ENSMUST00000109699 Nsun2-001 protein_coding Mus_musculus 0 1849
ENSMUST00000136891 Nsun2-007 retained_intron Mus_musculus 0 263

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