C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium channel, voltage-dependent, T type, alpha 1G subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107785 Cacna1g-006 ENSMUSG00000020866 10090 - 11:94408636-94474100 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000107785
Transcript ID Breast Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000107785 2.058±0.00 1.250±0.26 0.189±0.00 0.030±0.02 0.096±0.00 0.106±0.02 0.182±0.04 0.328±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001508 IMP action potential
GO:0002027 IMP regulation of heart rate
GO:0005245 IDA voltage-gated calcium channel activity
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0005891 IEA voltage-gated calcium channel complex
GO:0007268 IGI synaptic transmission
GO:0008332 IDA low voltage-gated calcium channel activity
GO:0010045 IMP response to nickel cation
GO:0034765 IEA regulation of ion transmembrane transport
GO:0045956 IBA positive regulation of calcium ion-dependent exocytosis
GO:0060371 IMP regulation of atrial cardiac muscle cell membrane depolarization
GO:0070509 IBA calcium ion import
GO:0070588 IEA calcium ion transmembrane transport
GO:0086010 IBA membrane depolarization during action potential

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000123534 cacna1g-201 protein_coding Danio_rerio 0 697
ENSDART00000153256 cacna1g-001 protein_coding Danio_rerio 0 697
ENSDART00000085210 cacna1ha-201 protein_coding Danio_rerio 0 569
ENSDART00000154869 cacna1ha-001 protein_coding Danio_rerio 0 569
ENSDART00000103611 cacna1hb-201 protein_coding Danio_rerio 0 396
ENSDART00000141604 cacna1hb-001 protein_coding Danio_rerio 0 387
ENST00000348261 CACNA1H-001 protein_coding Homo_sapiens 0 1229
ENST00000352832 CACNA1G-001 protein_coding Homo_sapiens 0 8268
ENST00000354983 CACNA1G-201 protein_coding Homo_sapiens 0 7838
ENST00000358244 CACNA1G-027 protein_coding Homo_sapiens 0 8706
ENST00000358590 CACNA1H-201 protein_coding Homo_sapiens 0 1212
ENST00000359106 CACNA1G-013 protein_coding Homo_sapiens 0 3842
ENST00000360761 CACNA1G-008 protein_coding Homo_sapiens 0 6408
ENST00000401624 CACNA1I-003 protein_coding Homo_sapiens 0 1144
ENST00000402142 CACNA1I-001 protein_coding Homo_sapiens 0 1144
ENST00000404898 CACNA1I-002 protein_coding Homo_sapiens 0 1144
ENST00000407673 CACNA1I-004 protein_coding Homo_sapiens 0 1144
ENST00000416767 CACNA1G-023 protein_coding Homo_sapiens 0 3875
ENST00000429973 CACNA1G-007 protein_coding Homo_sapiens 0 3888
ENST00000442258 CACNA1G-019 protein_coding Homo_sapiens 0 7914
ENST00000502264 CACNA1G-031 protein_coding Homo_sapiens 0 5993
ENST00000503436 CACNA1G-017 nonsense_mediated_decay Homo_sapiens 0 5993
ENST00000503485 CACNA1G-005 protein_coding Homo_sapiens 0 3842
ENST00000503607 CACNA1G-033 nonsense_mediated_decay Homo_sapiens 0 6582
ENST00000504076 CACNA1G-014 nonsense_mediated_decay Homo_sapiens 0 3842
ENST00000505165 CACNA1G-032 protein_coding Homo_sapiens 0 3842
ENST00000506406 CACNA1G-012 nonsense_mediated_decay Homo_sapiens 0 3842
ENST00000506520 CACNA1G-029 protein_coding Homo_sapiens 0 1269
ENST00000507336 CACNA1G-011 protein_coding Homo_sapiens 0 3842
ENST00000507510 CACNA1G-009 protein_coding Homo_sapiens 0 3842
ENST00000507609 CACNA1G-016 protein_coding Homo_sapiens 0 3842
ENST00000507896 CACNA1G-028 protein_coding Homo_sapiens 0 4477
ENST00000510115 CACNA1G-018 protein_coding Homo_sapiens 0 7424
ENST00000510366 CACNA1G-004 protein_coding Homo_sapiens 0 3842
ENST00000511765 CACNA1G-010 nonsense_mediated_decay Homo_sapiens 0 3842
ENST00000511768 CACNA1G-030 nonsense_mediated_decay Homo_sapiens 0 5993
ENST00000512389 CACNA1G-024 protein_coding Homo_sapiens 0 4017
ENST00000513689 CACNA1G-015 protein_coding Homo_sapiens 0 3842
ENST00000513964 CACNA1G-002 protein_coding Homo_sapiens 0 3842
ENST00000514079 CACNA1G-026 protein_coding Homo_sapiens 0 3842
ENST00000514181 CACNA1G-021 protein_coding Homo_sapiens 0 3842
ENST00000514717 CACNA1G-003 protein_coding Homo_sapiens 0 5731
ENST00000515165 CACNA1G-020 protein_coding Homo_sapiens 0 3842
ENST00000515411 CACNA1G-034 protein_coding Homo_sapiens 0 3842
ENST00000515765 CACNA1G-025 protein_coding Homo_sapiens 0 3842
ENST00000562079 CACNA1H-005 protein_coding Homo_sapiens 0 1212
ENST00000564231 CACNA1H-003 protein_coding Homo_sapiens 0 1229
ENST00000564927 CACNA1H-006 protein_coding Homo_sapiens 0 841
ENST00000565831 CACNA1H-002 protein_coding Homo_sapiens 0 1212
ENST00000569107 CACNA1H-004 protein_coding Homo_sapiens 0 1219
ENST00000570567 CACNA1G-035 protein_coding Homo_sapiens 0 1098

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