C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000507378 RP11-632F7.1-001 ENSG00000248780 9606 + 4:40786110-40786710 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonKidneyLungOvaryPlacentaTestisENST00000507378
Transcript ID Breast Colon Kidney Lung Ovary Placenta Testis
ENST00000507378 0.154±0.14 0.075±0.06 0.284±0.00 0.192±0.14 0.390±0.29 0.166±0.10 0.162±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00038Q CIL_00038Q_0001 CGP 4:40423267-40809985
CIL_00038T CIL_00038T_0001 CGP 4:40749897-41216714

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000146905 Arl4a-001 protein_coding Mus_musculus 0 839
ENSMUST00000101472 Arl4a-002 protein_coding Mus_musculus 0 839
ENSMUST00000144910 Arl4a-004 nonsense_mediated_decay Mus_musculus 0 281
ENSMUST00000136441 Arl4a-003 nonsense_mediated_decay Mus_musculus 0 281

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