C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: secretion associated, Ras related GTPase 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000507419 SAR1B-004 ENSG00000152700 9606 - 5:134606429-134649271 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089W CIL_00089W_0001 VISTA 5:134136326-134739629
CIL_0007JT CIL_0007JT_0002 UCNEbase 5:134524545-135264654
CIL_00062X CIL_00062X_0002 CGP 5:134601144-134727823

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0004871 IEA signal transducer activity
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0006886 IEA intracellular protein transport
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0019001 IEA guanyl nucleotide binding
GO:0031683 IEA G-protein beta/gamma-subunit complex binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020653 Sar1b-001 protein_coding Mus_musculus 0 861
ENSMUST00000154325 Sec24a-002 retained_intron Mus_musculus 3.00004e-41 174
ENSMUST00000147255 Sec24a-003 retained_intron Mus_musculus 3.00004e-41 174
ENSMUST00000109097 Sec24a-001 protein_coding Mus_musculus 3e-26 124
ENSMUST00000064297 Sec24a-004 protein_coding Mus_musculus 3e-21 108
ENSMUST00000109092 Sec24a-005 protein_coding Mus_musculus 3e-21 108
ENSMUST00000038210 Sec24a-006 protein_coding Mus_musculus 3e-21 108

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