C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: solute carrier family 35, member B1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000507477 SLC35B1-006 ENSG00000121073 9606 - 17:49701328-49703990 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLungENST00000507477
Transcript ID Breast Lung
ENST00000507477 0.368±0.00 0.276±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000877 CIL_000877_0001 VISTA 17:49438854-50041456
CIL_0009BV CIL_0009BV_0001 VISTA 17:49438877-50041441
CIL_0007QJ CIL_0007QJ_0001 VISTA 17:49459872-50061823
CIL_0004N2 CIL_0004N2_0002 CGP 17:49598884-49709014
CIL_0004N1 CIL_0004N1_0002 CGP 17:49700943-49789180

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000131193 Slc35b1-002 nonsense_mediated_decay Mus_musculus 0 339
ENSMUST00000021243 Slc35b1-001 protein_coding Mus_musculus 0 339
ENSMUST00000143090 Slc35b1-005 retained_intron Mus_musculus 0 309

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