C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 35, member B1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021243 Slc35b1-001 ENSMUSG00000020873 10090 + 11:95384692-95391776 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021243
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021243 12.460±1.42 7.643±1.60 10.393±3.05 7.417±5.58 15.662±7.30 17.796±2.25 8.305±1.54 12.984±2.65 13.293±4.36 10.445±2.00 9.054±1.28 14.829±5.45 18.459±12.66 13.325±1.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QJ CIL_0007QJ_0002 VISTA 11:95039208-95641127
CIL_000877 CIL_000877_0002 VISTA 11:95055809-95658196
CIL_0009BV CIL_0009BV_0002 VISTA 11:95055825-95658170

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0008643 IEA carbohydrate transport
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000240333 SLC35B1-001 protein_coding Homo_sapiens 0 1426
ENST00000435059 SLC35B1-004 retained_intron Homo_sapiens 0 887
ENST00000502268 SLC35B1-016 nonsense_mediated_decay Homo_sapiens 0 438
ENST00000502406 SLC35B1-003 retained_intron Homo_sapiens 0 852
ENST00000503334 SLC35B1-009 protein_coding Homo_sapiens 0 813
ENST00000504260 SLC35B1-005 retained_intron Homo_sapiens 0 652
ENST00000507477 SLC35B1-006 retained_intron Homo_sapiens 0 339
ENST00000507773 SLC35B1-002 nonsense_mediated_decay Homo_sapiens 0 1256
ENST00000508520 SLC35B1-008 protein_coding Homo_sapiens 0 832
ENST00000508926 SLC35B1-017 retained_intron Homo_sapiens 0 412
ENST00000509781 SLC35B1-011 retained_intron Homo_sapiens 0 584
ENST00000514907 SLC35B1-010 protein_coding Homo_sapiens 0 702
ENST00000515850 SLC35B1-012 protein_coding Homo_sapiens 0 702

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