C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 35, member B1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000131193 Slc35b1-002 ENSMUSG00000020873 10090 + 11:95384891-95391776 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000131193
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000131193 18.069±5.96 30.093±4.80 14.866±0.81 15.654±3.50 19.108±6.78 21.633±5.29 9.081±1.41 12.424±2.98 16.206±8.94 23.032±4.33 13.721±1.84 27.342±11.73 18.580±3.33 4.913±1.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QJ CIL_0007QJ_0002 VISTA 11:95039208-95641127
CIL_000877 CIL_000877_0002 VISTA 11:95055809-95658196
CIL_0009BV CIL_0009BV_0002 VISTA 11:95055825-95658170

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000240333 SLC35B1-001 protein_coding Homo_sapiens 0 1223
ENST00000502268 SLC35B1-016 nonsense_mediated_decay Homo_sapiens 0 438
ENST00000502406 SLC35B1-003 retained_intron Homo_sapiens 0 852
ENST00000503334 SLC35B1-009 protein_coding Homo_sapiens 0 935
ENST00000504260 SLC35B1-005 retained_intron Homo_sapiens 0 652
ENST00000507477 SLC35B1-006 retained_intron Homo_sapiens 0 339
ENST00000507773 SLC35B1-002 nonsense_mediated_decay Homo_sapiens 0 1362
ENST00000508520 SLC35B1-008 protein_coding Homo_sapiens 0 645

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