C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | intraflagellar transport 122 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000507564  |
IFT122-006 |
ENSG00000163913 |
9606 | + |
3:129440212-129520265  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00030X | CIL_00030X_0001 | CGP | 3:129401321-129440179 |
| CIL_00030Y | CIL_00030Y_0001 | CGP | 3:129430944-129520507 |
| CIL_00030V | CIL_00030V_0001 | CGP | 3:129440036-129535169 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001843 | ISS | neural tube closure |
| GO:0005515 | IPI:IEA | protein binding |
| GO:0005737 | IEA | cytoplasm |
| GO:0010172 | ISS | embryonic body morphogenesis |
| GO:0016020 | IDA | membrane |
| GO:0030991 | IDA | intraciliary transport particle A |
| GO:0032391 | ISS | photoreceptor connecting cilium |
| GO:0035050 | ISS | embryonic heart tube development |
| GO:0035721 | ISS | intraciliary retrograde transport |
| GO:0045879 | ISS | negative regulation of smoothened signaling pathway |
| GO:0048593 | ISS | camera-type eye morphogenesis |
| GO:0060173 | ISS | limb development |
| GO:0060271 | ISS | cilium morphogenesis |
| GO:0061512 | IMP | protein localization to cilium |
| GO:0072372 | ISS | primary cilium |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000038234
|
Ift122-003 | protein_coding | Mus_musculus | 0 | 3842 |
|
ENSMUST00000112925
|
Ift122-001 | protein_coding | Mus_musculus | 0 | 3821 |
|
ENSMUST00000112923
|
Ift122-004 | protein_coding | Mus_musculus | 0 | 3432 |
|
ENSMUST00000141305
|
Ift122-002 | nonsense_mediated_decay | Mus_musculus | 0 | 2623 |
|
ENSMUST00000124283
|
Ift122-005 | processed_transcript | Mus_musculus | 0 | 1989 |
|
ENSMUST00000155565
|
Ift122-006 | retained_intron | Mus_musculus | 0 | 1029 |
|
ENSMUST00000149083
|
Ift122-008 | processed_transcript | Mus_musculus | 0 | 928 |
|
ENSMUST00000146950
|
Ift122-011 | processed_transcript | Mus_musculus | 0 | 440 |
|
ENSMUST00000138113
|
Ift122-009 | processed_transcript | Mus_musculus | 0 | 438 |
|
ENSMUST00000125889
|
Ift122-007 | processed_transcript | Mus_musculus | 0 | 279 |
