C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GTF2H2 family member C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000507595 GTF2H2C-013 ENSG00000183474 9606 + 5:69565122-69582420 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLiverOvaryPlacentaENST00000507595
Transcript ID Brain Kidney Liver Ovary Placenta
ENST00000507595 0.876±0.00 1.112±0.00 0.836±0.00 0.151±0.00 0.630±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005K7 CIL_0005K7_0002 CGP 5:69492292-69594723

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000439 IEA core TFIIH complex
GO:0006289 IEA nucleotide-excision repair
GO:0006351 IEA transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000142182 Gtf2h2-004 retained_intron Mus_musculus 0 647
ENSMUST00000066984 Gtf2h2-001 protein_coding Mus_musculus 0 645
ENSMUST00000145266 Gtf2h2-003 nonsense_mediated_decay Mus_musculus 0 645
ENSMUST00000124644 Gtf2h2-008 processed_transcript Mus_musculus 0 405
ENSMUST00000066940 Gtf2h2-006 protein_coding Mus_musculus 0 363
ENSMUST00000134842 Gtf2h2-002 nonsense_mediated_decay Mus_musculus 0 363
ENSMUST00000152049 Gtf2h2-007 processed_transcript Mus_musculus 0 361
ENSMUST00000147229 Gtf2h2-005 retained_intron Mus_musculus 0 361

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