C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 35, member B1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000507773 SLC35B1-002 ENSG00000121073 9606 - 17:49701339-49708090 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000507773
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000507773 6.504±0.00 12.349±0.00 8.292±3.17 3.548±1.93 3.557±0.02 6.354±4.96 10.594±9.52 10.677±7.44 5.372±3.45 13.019±5.99 11.410±2.97 11.121±3.61 9.453±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000877 CIL_000877_0001 VISTA 17:49438854-50041456
CIL_0009BV CIL_0009BV_0001 VISTA 17:49438877-50041441
CIL_0007QJ CIL_0007QJ_0001 VISTA 17:49459872-50061823
CIL_0004N2 CIL_0004N2_0002 CGP 17:49598884-49709014
CIL_0004N1 CIL_0004N1_0002 CGP 17:49700943-49789180

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000131193 Slc35b1-002 nonsense_mediated_decay Mus_musculus 0 1362
ENSMUST00000021243 Slc35b1-001 protein_coding Mus_musculus 0 1256
ENSMUST00000143090 Slc35b1-005 retained_intron Mus_musculus 0 305

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