C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: sorting nexin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000507852 SNX2-010 ENSG00000205302 9606 + 5:122827434-122828046 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005KK CIL_0005KK_0002 CGP 5:122311354-122830108
CIL_0004B0 CIL_0004B0_0001 CGP 5:122774996-123029354

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120410 Gm12543-001 transcribed_processed_pseudogene Mus_musculus 8e-31 137
ENSMUST00000037850 Snx2-201 protein_coding Mus_musculus 8e-31 137
ENSMUST00000123665 Snx30-004 processed_transcript Mus_musculus 0.000000001 68

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