C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | PDZ and LIM domain 5 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000509357  |
PDLIM5-015 |
ENSG00000163110 |
9606 | + |
4:94523724-94618152  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00091X | CIL_00091X_0001 | VISTA | 4:94368294-94970308 |
| CIL_0001S9 | CIL_0001S9_0002 | CGP | 4:94451857-95158448 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IEA | protein binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000029941
|
Pdlim5-201 | protein_coding | Mus_musculus | 0 | 291 |
|
ENSMUST00000058626
|
Pdlim5-202 | protein_coding | Mus_musculus | 0 | 261 |
|
ENSMUST00000170361
|
Pdlim5-205 | protein_coding | Mus_musculus | 0 | 259 |
|
ENSMUST00000090134
|
Pdlim5-203 | protein_coding | Mus_musculus | 0 | 259 |
|
ENSMUST00000168967
|
Pdlim5-204 | protein_coding | Mus_musculus | 0 | 257 |
