| Transcript ID | Heart |
|---|---|
| ENSMUST00000170361 | 103.545±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | PDZ and LIM domain 5 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000170361  |
Pdlim5-205 |
ENSMUSG00000028273 |
10090 | - |
3:142302080-142391850  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00091X | CIL_00091X_0002 | VISTA | 3:141937411-142539503 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI | protein binding |
| GO:0030018 | IDA | Z disc |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000317968
|
PDLIM5-001 | protein_coding | Homo_sapiens | 0 | 359 |
|
ENST00000318007
|
PDLIM5-201 | protein_coding | Homo_sapiens | 0 | 584 |
|
ENST00000359265
|
PDLIM5-004 | protein_coding | Homo_sapiens | 4e-37 | 159 |
|
ENST00000380176
|
PDLIM5-009 | processed_transcript | Homo_sapiens | 0 | 283 |
|
ENST00000380180
|
PDLIM5-202 | protein_coding | Homo_sapiens | 0 | 992 |
|
ENST00000437932
|
PDLIM5-203 | protein_coding | Homo_sapiens | 0 | 368 |
|
ENST00000503974
|
PDLIM5-005 | protein_coding | Homo_sapiens | 0 | 719 |
|
ENST00000504489
|
PDLIM5-003 | protein_coding | Homo_sapiens | 1e-38 | 163 |
|
ENST00000508216
|
PDLIM5-008 | protein_coding | Homo_sapiens | 0 | 992 |
|
ENST00000508531
|
PDLIM5-006 | processed_transcript | Homo_sapiens | 0 | 237 |
|
ENST00000509333
|
PDLIM5-014 | retained_intron | Homo_sapiens | 0 | 359 |
|
ENST00000509357
|
PDLIM5-015 | nonsense_mediated_decay | Homo_sapiens | 0 | 259 |
|
ENST00000511586
|
PDLIM5-007 | processed_transcript | Homo_sapiens | 0 | 257 |
|
ENST00000511767
|
PDLIM5-018 | processed_transcript | Homo_sapiens | 0 | 324 |
|
ENST00000512274
|
PDLIM5-002 | protein_coding | Homo_sapiens | 1e-37 | 159 |
|
ENST00000513341
|
PDLIM5-016 | protein_coding | Homo_sapiens | 0 | 531 |
|
ENST00000514743
|
PDLIM5-010 | protein_coding | Homo_sapiens | 0 | 721 |
|
ENST00000514830
|
PDLIM5-017 | processed_transcript | Homo_sapiens | 0 | 507 |
|
ENST00000542407
|
PDLIM5-204 | protein_coding | Homo_sapiens | 0 | 257 |
|
ENST00000615540
|
PDLIM5-205 | protein_coding | Homo_sapiens | 0 | 721 |
