C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: speckle-type POZ protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000510476 SPOP-008 ENSG00000121067 9606 - 17:49621946-49646622 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000877 CIL_000877_0001 VISTA 17:49438854-50041456
CIL_0009BV CIL_0009BV_0001 VISTA 17:49438877-50041441
CIL_0007QJ CIL_0007QJ_0001 VISTA 17:49459872-50061823
CIL_0004N3 CIL_0004N3_0002 CGP 17:49575858-49678234
CIL_0004N2 CIL_0004N2_0002 CGP 17:49598884-49709014

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000127713 Spop-004 protein_coding Mus_musculus 0 392
ENSMUST00000150884 Spop-003 protein_coding Mus_musculus 0 392
ENSMUST00000107724 Spop-002 protein_coding Mus_musculus 0 392
ENSMUST00000107722 Spop-001 protein_coding Mus_musculus 0 392
ENSMUST00000120488 Klhl22-001 protein_coding Mus_musculus 0.000000002 68
ENSMUST00000155115 Adam17-004 retained_intron Mus_musculus 0.000000006 66
ENSMUST00000146537 Abl1-002 processed_transcript Mus_musculus 0.00000008 62
ENSMUST00000165682 Rasl12-202 protein_coding Mus_musculus 0.00000008 62
ENSMUST00000123200 Paqr6-004 retained_intron Mus_musculus 0.000001 58

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