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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | speckle-type POZ protein | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000510476  |
SPOP-008 |
ENSG00000121067 |
9606 | - |
17:49621946-49646622  |
protein_coding |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000877 | CIL_000877_0001 | VISTA | 17:49438854-50041456 |
| CIL_0009BV | CIL_0009BV_0001 | VISTA | 17:49438877-50041441 |
| CIL_0007QJ | CIL_0007QJ_0001 | VISTA | 17:49459872-50061823 |
| CIL_0004N3 | CIL_0004N3_0002 | CGP | 17:49575858-49678234 |
| CIL_0004N2 | CIL_0004N2_0002 | CGP | 17:49598884-49709014 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IEA | protein binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000127713
|
Spop-004 | protein_coding | Mus_musculus | 0 | 392 |
|
ENSMUST00000150884
|
Spop-003 | protein_coding | Mus_musculus | 0 | 392 |
|
ENSMUST00000107724
|
Spop-002 | protein_coding | Mus_musculus | 0 | 392 |
|
ENSMUST00000107722
|
Spop-001 | protein_coding | Mus_musculus | 0 | 392 |
|
ENSMUST00000120488
|
Klhl22-001 | protein_coding | Mus_musculus | 0.000000002 | 68 |
|
ENSMUST00000155115
|
Adam17-004 | retained_intron | Mus_musculus | 0.000000006 | 66 |
|
ENSMUST00000146537
|
Abl1-002 | processed_transcript | Mus_musculus | 0.00000008 | 62 |
|
ENSMUST00000165682
|
Rasl12-202 | protein_coding | Mus_musculus | 0.00000008 | 62 |
|
ENSMUST00000123200
|
Paqr6-004 | retained_intron | Mus_musculus | 0.000001 | 58 |
