C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAS-like, family 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165682 Rasl12-202 ENSMUSG00000041696 10090 + 9:65398488-65414853 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSMUST00000165682
Transcript ID Liver
ENSMUST00000165682 0.055±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RY CIL_0007RY_0002 VISTA 9:65081642-65684657
CIL_0003WV CIL_0003WV_0002 CGP 9:65388684-65414853

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005575 ND cellular_component
GO:0006184 IEA GTP catabolic process
GO:0007264 IEA small GTPase mediated signal transduction
GO:0008150 ND biological_process
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000220062 RASL12-001 protein_coding Homo_sapiens 0 540
ENST00000262961 ZFR2-003 protein_coding Homo_sapiens 0.000000003 69
ENST00000323929 MRE11A-001 protein_coding Homo_sapiens 0.00000006 66
ENST00000328737 ANKRD44-002 protein_coding Homo_sapiens 0.00000000001 77
ENST00000379887 ARIH1-001 protein_coding Homo_sapiens 0.0001 57
ENST00000421977 RASL12-002 protein_coding Homo_sapiens 0 350
ENST00000434605 RASL12-003 protein_coding Homo_sapiens 0 422
ENST00000472030 RNF103-002 retained_intron Homo_sapiens 0.0000000008 71
ENST00000477128 UTP6-004 retained_intron Homo_sapiens 0.0000000000002 82
ENST00000503676 SPOP-007 protein_coding Homo_sapiens 0.0000002 62
ENST00000504242 SAR1B-005 processed_transcript Homo_sapiens 0.000000002 68
ENST00000510476 SPOP-008 protein_coding Homo_sapiens 0.00000008 62

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