C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: huntingtin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000510626 HTT-002 ENSG00000197386 9606 + 4:3128339-3243940 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLungOvaryENST00000510626
Transcript ID Bladder Lung Ovary
ENST00000510626 0.518±0.00 1.459±0.00 0.542±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000748 CIL_000748_0001 CGP 4:2963608-3243959
CIL_000747 CIL_000747_0001 CGP 4:3074681-3271738

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000080036 Htt-001 protein_coding Mus_musculus 0 3801
ENSMUST00000124272 Htt-005 retained_intron Mus_musculus 0 667
ENSMUST00000148953 Htt-002 retained_intron Mus_musculus 0 616
ENSMUST00000135039 Htt-004 retained_intron Mus_musculus 0 553

Loading