C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_000748_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000125388-ENSG00000197386 | CGP | 9606 | 4:2963608-3243959  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000125388  (GRK4)G protein-coupled receptor kinase 4 |
ENST00000345167 (GRK4-005)
|
2963821-3040747 | protein_coding | |
|
ENST00000398051 (GRK4-002)
|
2963608-3040727 | protein_coding | ||
|
ENST00000398052 (GRK4-001)
|
2963728-3040747 | protein_coding | ||
|
ENST00000503518 (GRK4-004)
|
2963634-2966889 | protein_coding | ||
|
ENST00000504308 (GRK4-008)
|
3029323-3038578 | processed_transcript | ||
|
ENST00000504933 (GRK4-012)
|
2963821-3040747 | protein_coding | ||
|
ENST00000505271 (GRK4-009)
|
3022412-3040747 | processed_transcript | ||
|
ENST00000507230 (GRK4-011)
|
2969169-2971192 | retained_intron | ||
|
ENST00000509545 (GRK4-007)
|
3027911-3038878 | processed_transcript | ||
|
ENST00000511827 (GRK4-006)
|
3027911-3040747 | processed_transcript | ||
|
ENSG00000197386 (HTT) huntingtin |
ENST00000355072 (HTT-001)
|
3074681-3243959 | protein_coding | |
|
ENST00000502820 (HTT-004)
|
3203006-3206579 | processed_transcript | ||
|
ENST00000506137 (HTT-006)
|
3115329-3121712 | retained_intron | ||
|
ENST00000508321 (HTT-003)
|
3235424-3236179 | retained_intron | ||
|
ENST00000509043 (HTT-012)
|
3178347-3180794 | retained_intron | ||
|
ENST00000509618 (HTT-011)
|
3160362-3173227 | protein_coding | ||
|
ENST00000509751 (HTT-009)
|
3211912-3213055 | retained_intron | ||
|
ENST00000510626 (HTT-002)
|
3128339-3243940 | retained_intron | ||
|
ENST00000512068 (HTT-010)
|
3228645-3229922 | retained_intron | ||
|
ENST00000512909 (HTT-013)
|
3121400-3123466 | retained_intron | ||
|
ENST00000513326 (HTT-005)
|
3178347-3180787 | retained_intron | ||
|
ENST00000513639 (HTT-008)
|
3178347-3180673 | retained_intron | ||
|
ENST00000513806 (HTT-007)
|
3228713-3235396 | processed_transcript | ||
|
ENSG00000199335 (RNU6-204P) RNA, U6 small nuclear 204, pseudogene |
ENST00000362465 (RNU6-204P-201)
|
3044101-3044207 | snRNA | |
|
ENSG00000251075 (HTT-AS) HTT antisense RNA (head to head) |
ENST00000503893 (HTT-AS-001)
|
3063471-3074514 | antisense | |
|
ENSG00000274693 (HTT-AS1_2) HTT antisense RNA 1 conserved region 2 |
ENST00000621529 (HTT-AS1_2.1-201)
|
3069977-3070151 | misc_RNA | |
|
ENSG00000278136 (AL390065.1) |
ENST00000612230 (AL390065.1-201)
|
2981427-2981512 | miRNA | |
|
ENSG00000278778 (HTT-AS1_1) HTT antisense RNA 1 conserved region 1 |
ENST00000612914 (HTT-AS1_1.1-201)
|
3063472-3063701 | misc_RNA | |
| CIL_000748_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000052783-ENSMUSG00000029104 | CGP | 10090 | 5:34660379-34912534 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000029104 (Htt) huntingtin |
ENSMUST00000080036 (Htt-001)
|
34761744-34912534 | protein_coding | |
|
ENSMUST00000123755 (Htt-003)
|
34761761-34814709 | retained_intron | ||
|
ENSMUST00000124272 (Htt-005)
|
34886451-34903724 | retained_intron | ||
|
ENSMUST00000135039 (Htt-004)
|
34877192-34884978 | retained_intron | ||
|
ENSMUST00000148953 (Htt-002)
|
34761740-34820754 | retained_intron | ||
|
ENSMUST00000156490 (Htt-006)
|
34806728-34811793 | retained_intron | ||
|
ENSMUSG00000052783 (Grk4) G protein-coupled receptor kinase 4 |
ENSMUST00000001112 (Grk4-001)
|
34660379-34755303 | protein_coding | |
|
ENSMUST00000074651 (Grk4-002)
|
34660379-34701083 | protein_coding | ||
|
ENSMUST00000134217 (Grk4-003)
|
34744443-34755305 | processed_transcript | ||
|
ENSMUST00000148588 (Grk4-005)
|
34660975-34674715 | protein_coding | ||
|
ENSMUST00000153323 (Grk4-004)
|
34710133-34745337 | processed_transcript | ||
Expression Patterns
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