C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | SMAD family member 5 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000511116  |
SMAD5-003 |
ENSG00000113658 |
9606 | + |
5:136132847-136154163  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005P2 | CIL_0005P2_0001 | CGP | 5:136028895-136188747 |
| CIL_0005P3 | CIL_0005P3_0001 | CGP | 5:136132845-136365537 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003700 | IEA | sequence-specific DNA binding transcription factor activity |
| GO:0005622 | IEA | intracellular |
| GO:0005667 | IEA | transcription factor complex |
| GO:0006351 | IEA | transcription, DNA-templated |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
| GO:0007179 | IEA | transforming growth factor beta receptor signaling pathway |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000109874
|
Smad5-003 | protein_coding | Mus_musculus | 0 | 652 |
|
ENSMUST00000132302
|
Smad5-005 | processed_transcript | Mus_musculus | 0 | 652 |
|
ENSMUST00000138677
|
Smad5-004 | processed_transcript | Mus_musculus | 0 | 652 |
|
ENSMUST00000069557
|
Smad5-001 | protein_coding | Mus_musculus | 0 | 652 |
|
ENSMUST00000109876
|
Smad5-002 | protein_coding | Mus_musculus | 0 | 651 |
