C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SMAD family member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138677 Smad5-004 ENSMUSG00000021540 10090 + 13:56703039-56733214 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000138677
Transcript ID Testis
ENSMUST00000138677 3.073±0.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005P2 CIL_0005P2_0002 CGP 13:56609603-56742377
CIL_0005P3 CIL_0005P3_0002 CGP 13:56703010-56895789

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000506223 SMAD5-008 protein_coding Homo_sapiens 0 411
ENST00000507118 SMAD5-002 protein_coding Homo_sapiens 0 686
ENST00000507637 SMAD5-010 protein_coding Homo_sapiens 0 689
ENST00000511116 SMAD5-003 protein_coding Homo_sapiens 0 652
ENST00000514777 SMAD5-011 processed_transcript Homo_sapiens 0 342
ENST00000545279 SMAD5-001 protein_coding Homo_sapiens 0 1530
ENST00000545620 SMAD5-201 protein_coding Homo_sapiens 0 1600

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