C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock 70kDa protein 8 pseudogene 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000511877 HSPA8P4-001 ENSG00000248610 9606 + 5:130140031-130141950 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000511877
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000511877 0.045±0.00 0.052±0.00 0.320±0.30 0.191±0.13 0.184±0.00 0.080±0.07 0.011±0.00 0.093±0.04 0.122±0.12 0.005±0.00 0.139±0.15 0.060±0.03 0.041±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006CU CIL_0006CU_0002 CGP 5:129748079-130186634

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117405 Gm15459-001 processed_pseudogene Mus_musculus 0 1483
ENSMUST00000015800 Hspa8-001 protein_coding Mus_musculus 0 1467
ENSMUST00000187358 RP23-241J21.1-001 processed_pseudogene Mus_musculus 0 1371
ENSMUST00000188705 RP23-76C10.2-001 processed_pseudogene Mus_musculus 0 1184
ENSMUST00000117557 Hspa8-003 protein_coding Mus_musculus 0 1123
ENSMUST00000190856 RP24-302H24.1-001 processed_pseudogene Mus_musculus 0 898
ENSMUST00000122434 Gm13437-001 processed_pseudogene Mus_musculus 0 802
ENSMUST00000118350 Gm15604-001 processed_pseudogene Mus_musculus 0 586
ENSMUST00000153847 Hspa8-006 processed_transcript Mus_musculus 0 571
ENSMUST00000177767 Gm8355-201 processed_pseudogene Mus_musculus 0 569
ENSMUST00000120949 Gm9436-001 processed_pseudogene Mus_musculus 0 529
ENSMUST00000117477 Gm8107-001 processed_pseudogene Mus_musculus 0 315
ENSMUST00000149936 Hspa8-002 retained_intron Mus_musculus 3e-31 141

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