C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protocadherin 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000511884 PCDH7-003 ENSG00000169851 9606 + 4:30722354-31146805 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000511884
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000511884 0.061±0.00 2.285±0.00 0.254±0.00 7.683±1.42 1.642±1.07 4.774±2.42 2.357±0.03 0.624±0.46 1.504±1.38 1.283±0.47 0.070±0.01 0.986±0.05 0.011±0.00 0.845±0.70

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00079S CIL_00079S_0001 CGP 4:26857678-31146805
CIL_0002TS CIL_0002TS_0002 CGP 4:30720415-36244509

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094783 Pcdh7-202 protein_coding Mus_musculus 0 4194
ENSMUST00000068110 Pcdh7-201 protein_coding Mus_musculus 0 3007

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