C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SH3 domain and tetratricopeptide repeats 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000515425 SH3TC2-001 ENSG00000169247 9606 - 5:149004621-149063124 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverPlacentaENST00000515425
Transcript ID Heart Liver Placenta
ENST00000515425 0.311±0.00 0.283±0.00 0.495±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001GC CIL_0001GC_0002 CGP 5:148923639-149260542

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0008219 IEA cell death
GO:0022011 IEA myelination in peripheral nervous system
GO:0031410 IEA cytoplasmic vesicle
GO:0032287 IEA peripheral nervous system myelin maintenance
GO:0033157 IEA regulation of intracellular protein transport
GO:0055037 IEA recycling endosome
GO:1901184 IEA regulation of ERBB signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000051720 Sh3tc2-201 protein_coding Mus_musculus 0 3570

Loading