C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001GC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000076300-ENSDARG00000029772 CGP 7955 14:43267139-43418987
GeneTranscriptPositionBiotype
ENSDARG00000029772 (ablim3)
actin binding LIM protein family, member 3 		ENSDART00000041834 (ablim3-201) 43308398-43418987 protein_coding
ENSDART00000052595 (ablim3-202) 43308398-43418987 protein_coding
ENSDARG00000076300 (sh3tc2)
SH3 domain and tetratricopeptide repeats 2 		ENSDART00000110927 (sh3tc2-201) 43267139-43274917 protein_coding
ENSDART00000132051 (sh3tc2-001) 43267144-43279354 protein_coding
ENSDART00000139508 (sh3tc2-002) 43267144-43279374 protein_coding
CIL_0001GC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000169247-ENSG00000173210 CGP 9606 5:148923639-149260542
GeneTranscriptPositionBiotype
ENSG00000169247 (SH3TC2)
SH3 domain and tetratricopeptide repeats 2 		ENST00000323829 (SH3TC2-004) 149001348-149063044 nonsense_mediated_decay
ENST00000502274 (SH3TC2-011) 149003953-149008611 protein_coding
ENST00000503071 (SH3TC2-017) 149031586-149042747 processed_transcript
ENST00000504091 (SH3TC2-006) 149043655-149063058 retained_intron
ENST00000504517 (SH3TC2-009) 149003947-149041546 nonsense_mediated_decay
ENST00000504690 (SH3TC2-012) 148923639-149063163 nonsense_mediated_decay
ENST00000510350 (SH3TC2-015) 148954801-149007111 processed_transcript
ENST00000510779 (SH3TC2-010) 149004551-149031616 nonsense_mediated_decay
ENST00000511307 (SH3TC2-003) 149026564-149063062 nonsense_mediated_decay
ENST00000511949 (SH3TC2-013) 149042720-149063062 retained_intron
ENST00000512049 (SH3TC2-005) 149004622-149063089 protein_coding
ENST00000513340 (SH3TC2-018) 149028385-149036021 processed_transcript
ENST00000513604 (SH3TC2-007) 149025778-149063047 nonsense_mediated_decay
ENST00000515229 (SH3TC2-016) 149002828-149008990 processed_transcript
ENST00000515425 (SH3TC2-001) 149004621-149063124 protein_coding
ENSG00000173210 (ABLIM3)
actin binding LIM protein family, member 3 		ENST00000309868 (ABLIM3-001) 149141503-149260439 protein_coding
ENST00000326685 (ABLIM3-006) 149141483-149260542 protein_coding
ENST00000356541 (ABLIM3-201) 149243348-149258457 protein_coding
ENST00000502855 (ABLIM3-010) 149252344-149258574 retained_intron
ENST00000504238 (ABLIM3-004) 149141821-149260439 protein_coding
ENST00000506113 (ABLIM3-002) 149141614-149260439 protein_coding
ENST00000508983 (ABLIM3-005) 149142047-149258413 protein_coding
ENST00000514212 (ABLIM3-009) 149233253-149242584 retained_intron
ENST00000515171 (ABLIM3-003) 149141751-149260439 nonsense_mediated_decay
ENST00000515796 (ABLIM3-008) 149183549-149200620 retained_intron
ENST00000517451 (ABLIM3-011) 149243348-149258457 protein_coding
ENST00000519549 (ABLIM3-012) 149237448-149240617 processed_transcript
ENSG00000200161 (RN7SKP145)
RNA, 7SK small nuclear pseudogene 145 		ENST00000363291 (RN7SKP145-201) 149116178-149116480 misc_RNA
ENSG00000250072 (CTC-529P8.1)
 ENST00000507318 (CTC-529P8.1-001) 149063503-149066985 lincRNA
ENST00000507373 (CTC-529P8.1-003) 149063609-149107138 lincRNA
ENST00000509139 (CTC-529P8.1-002) 149063455-149109787 lincRNA
ENST00000512007 (CTC-529P8.1-004) 149064273-149089452 lincRNA
ENST00000515304 (CTC-529P8.1-005) 149063486-149064174 lincRNA
ENST00000515519 (CTC-529P8.1-006) 149063317-149071527 lincRNA
ENSG00000251842 (RNU6-732P)
RNA, U6 small nuclear 732, pseudogene 		ENST00000516033 (RNU6-732P-201) 149057554-149057656 snRNA
ENSG00000253406 (AC012613.2)
 ENST00000523176 (AC012613.2-001) 149216523-149276805 antisense
ENSG00000272411 (RP11-44B19.1)
 ENST00000606841 (RP11-44B19.1-001) 148970340-148970653 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001GC_0001ENSDARG00000029772ENSDART00000041834ENSDART00000052595ENSDARG00000076300ENSDART00000110927ENSDART00000132051ENSDART00000139508CIL_0001GC_0002ENSG00000169247ENST00000323829ENST00000502274ENST00000503071ENST00000504091ENST00000504517ENST00000504690ENST00000510350ENST00000510779ENST00000511307ENST00000511949ENST00000512049ENST00000513340ENST00000513604ENST00000515229ENST00000515425ENSG00000173210ENST00000309868ENST00000326685ENST00000356541ENST00000502855ENST00000504238ENST00000506113ENST00000508983ENST00000514212ENST00000515171ENST00000515796ENST00000517451ENST00000519549ENSG00000200161ENST00000363291ENSG00000250072ENST00000507318ENST00000507373ENST00000509139ENST00000512007ENST00000515304ENST00000515519ENSG00000251842ENST00000516033ENSG00000253406ENST00000523176ENSG00000272411ENST00000606841
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001GC_0001ENSDARG00000029772ENSDART00000041834ENSDARG00000076300ENSDART00000110927ENSDART00000132051CIL_0001GC_0002ENSG00000169247ENST00000323829ENST00000502274ENST00000503071ENST00000504091ENST00000504517ENST00000504690ENST00000510779ENST00000511307ENST00000512049ENST00000513604ENST00000515229ENST00000515425ENSG00000173210ENST00000309868ENST00000326685ENST00000504238ENST00000506113ENST00000508983ENST00000515171ENSG00000200161ENST00000363291ENSG00000250072ENST00000507318ENST00000507373ENST00000512007ENST00000515304ENST00000515519ENSG00000251842ENST00000516033ENSG00000253406ENST00000523176ENSG00000272411ENST00000606841
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000029772 ENSDART00000041834 N/A N/A N/A 0.060±0.03 N/A N/A 0.159±0.14 0.056±0.00 N/A N/A 0.052±0.00 N/A N/A N/A
ENSDART00000052595 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000076300 ENSDART00000110927 N/A N/A N/A N/A N/A N/A 0.065±0.00 N/A 0.013±0.00 N/A 0.101±0.00 N/A N/A N/A
ENSDART00000132051 N/A N/A N/A 0.012±0.00 N/A N/A 0.033±0.02 N/A N/A N/A 0.051±0.00 N/A N/A N/A
ENSDART00000139508 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000169247 ENST00000323829 N/A N/A 0.016±0.00 1.188±0.36 0.068±0.00 0.160±0.00 0.067±0.00 N/A N/A N/A N/A 0.042±0.00 N/A 0.539±0.00
ENST00000502274 N/A N/A 0.022±0.00 N/A 0.065±0.00 0.046±0.00 N/A N/A 0.234±0.00 0.060±0.00 N/A 0.099±0.01 0.555±0.00 1.124±0.00
ENST00000503071 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.358±0.00 N/A N/A
ENST00000504091 N/A N/A N/A N/A N/A 0.011±0.00 N/A 0.024±0.00 0.056±0.04 0.045±0.00 0.042±0.00 0.009±0.00 N/A N/A
ENST00000504517 N/A 0.065±0.00 N/A N/A N/A N/A 0.216±0.00 N/A N/A N/A N/A N/A 0.893±0.37 N/A
ENST00000504690 0.039±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510350 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510779 N/A N/A N/A N/A N/A N/A 0.176±0.00 N/A 0.042±0.00 0.208±0.00 N/A 0.165±0.00 N/A N/A
ENST00000511307 N/A 0.086±0.00 N/A N/A N/A 0.067±0.00 N/A 0.064±0.00 N/A N/A N/A 0.076±0.00 N/A N/A
ENST00000511949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512049 N/A N/A N/A N/A N/A 0.027±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513340 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513604 0.020±0.00 0.054±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515229 N/A N/A N/A N/A N/A 0.147±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515425 N/A N/A N/A N/A N/A N/A 0.311±0.00 N/A 0.283±0.00 N/A N/A N/A 0.495±0.00 N/A
ENSG00000173210 ENST00000309868 N/A N/A N/A 1.703±0.20 N/A N/A N/A N/A N/A N/A 11.177±0.00 N/A N/A N/A
ENST00000326685 35.101±0.00 6.624±0.00 N/A 0.727±0.00 12.989±0.00 11.630±0.00 6.168±3.61 9.195±0.00 14.292±13.67 4.467±2.44 1.882±1.26 1.250±0.57 15.610±6.76 2.271±1.31
ENST00000356541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504238 33.938±0.00 6.127±0.00 N/A 4.540±0.00 8.417±7.59 5.720±5.17 1.524±0.00 8.888±0.00 N/A 3.915±0.00 N/A 1.154±0.27 N/A 3.320±0.00
ENST00000506113 N/A N/A N/A N/A N/A N/A 4.806±3.21 1.102±0.00 N/A N/A N/A N/A N/A N/A
ENST00000508983 N/A N/A 1.233±0.00 N/A N/A 0.293±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515171 20.582±0.00 N/A N/A N/A N/A 3.721±3.60 1.031±0.00 N/A 12.477±0.00 N/A N/A 2.110±0.00 7.047±2.58 0.379±0.00
ENST00000515796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519549 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000200161 ENST00000363291 N/A N/A N/A 0.062±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000250072 ENST00000507318 0.007±0.00 N/A 0.076±0.00 0.092±0.00 N/A 0.094±0.00 0.154±0.00 N/A 0.150±0.00 N/A N/A 0.025±0.02 0.012±0.00 0.277±0.26
ENST00000507373 N/A N/A N/A 0.483±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.113±0.00 N/A
ENST00000509139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512007 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.299±0.03 N/A
ENST00000515304 N/A N/A N/A 0.954±0.00 N/A N/A 1.093±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000515519 N/A N/A N/A 0.326±0.00 0.022±0.00 N/A N/A N/A N/A N/A N/A 0.034±0.00 0.065±0.00 0.919±0.00
ENSG00000251842 ENST00000516033 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.952±0.00
ENSG00000253406 ENST00000523176 N/A N/A 0.381±0.00 N/A 0.434±0.00 0.145±0.00 N/A N/A N/A N/A N/A 0.259±0.00 N/A N/A
ENSG00000272411 ENST00000606841 0.149±0.00 N/A N/A N/A N/A N/A 0.400±0.00 N/A N/A 0.172±0.00 N/A N/A 0.752±0.11 N/A

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