C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | small integral membrane protein 20 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000515764  |
SMIM20-003 |
ENSG00000250317 |
9606 | + |
4:25861830-25929545  |
processed_transcript |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000342 | CIL_000342_0002 | CGP | 4:25655301-25863760 |
| CIL_00079P | CIL_00079P_0001 | CGP | 4:25747427-25929874 |
| CIL_000343 | CIL_000343_0002 | CGP | 4:25861830-26435131 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000154268
|
Smim20-005 | retained_intron | Mus_musculus | 3e-27 | 126 |
|
ENSMUST00000147148
|
Smim20-002 | nonsense_mediated_decay | Mus_musculus | 1e-26 | 124 |
|
ENSMUST00000136866
|
Smim20-003 | nonsense_mediated_decay | Mus_musculus | 4e-26 | 122 |
|
ENSMUST00000121042
|
Smim20-001 | protein_coding | Mus_musculus | 4e-26 | 122 |
