C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_000343_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSDARG00000087729-ENSDARG00000052091 | CGP | 7955 | 7:62646745-62849573  |
|
| Gene | Transcript | Position | Biotype | |
ENSDARG00000052091  (rbpjb)recombination signal binding protein for immunoglobulin kappa J region b |
ENSDART00000092580 (rbpjb-001)
|
62723096-62849573 | protein_coding | |
|
ENSDARG00000087729 (SMIM20) small integral membrane protein 20 |
ENSDART00000128846 (SMIM20-201)
|
62646745-62652546 | protein_coding | |
| CIL_000343_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000250317-ENSG00000168214 | CGP | 9606 | 4:25861830-26435131 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSG00000091490 (SEL1L3) sel-1 suppressor of lin-12-like 3 (C. elegans) |
ENST00000264868 (SEL1L3-001)
|
25747433-25863595 | protein_coding | |
|
ENST00000399878 (SEL1L3-003)
|
25747427-25862959 | protein_coding | ||
|
ENST00000502949 (SEL1L3-002)
|
25748266-25863537 | protein_coding | ||
|
ENST00000507618 (SEL1L3-012)
|
25757534-25767772 | protein_coding | ||
|
ENST00000509290 (SEL1L3-011)
|
25767584-25776719 | retained_intron | ||
|
ENST00000510448 (SEL1L3-006)
|
25755922-25765360 | protein_coding | ||
|
ENST00000510880 (SEL1L3-010)
|
25847343-25860631 | protein_coding | ||
|
ENST00000512286 (SEL1L3-013)
|
25748064-25757852 | retained_intron | ||
|
ENST00000513364 (SEL1L3-009)
|
25833063-25862988 | processed_transcript | ||
|
ENST00000513416 (SEL1L3-005)
|
25747434-25759977 | retained_intron | ||
|
ENST00000513691 (SEL1L3-008)
|
25847382-25863742 | protein_coding | ||
|
ENST00000514321 (SEL1L3-014)
|
25777616-25779203 | protein_coding | ||
|
ENST00000514872 (SEL1L3-007)
|
25847461-25863760 | protein_coding | ||
|
ENSG00000168214 (RBPJ) recombination signal binding protein for immunoglobulin kappa J region |
ENST00000342295 (RBPJ-201)
|
26319710-26435128 | protein_coding | |
|
ENST00000342320 (RBPJ-003)
|
26362436-26435131 | protein_coding | ||
|
ENST00000345843 (RBPJ-001)
|
26319710-26431066 | protein_coding | ||
|
ENST00000348160 (RBPJ-030)
|
26320800-26431066 | protein_coding | ||
|
ENST00000355476 (RBPJ-202)
|
26320807-26435128 | protein_coding | ||
|
ENST00000361572 (RBPJ-002)
|
26320563-26431007 | protein_coding | ||
|
ENST00000504423 (RBPJ-026)
|
26428720-26430851 | protein_coding | ||
|
ENST00000504907 (RBPJ-010)
|
26362436-26431156 | protein_coding | ||
|
ENST00000504938 (RBPJ-020)
|
26362530-26420725 | protein_coding | ||
|
ENST00000505727 (RBPJ-028)
|
26430146-26431174 | retained_intron | ||
|
ENST00000505958 (RBPJ-006)
|
26321365-26406203 | protein_coding | ||
|
ENST00000506903 (RBPJ-025)
|
26420570-26424994 | retained_intron | ||
|
ENST00000506956 (RBPJ-011)
|
26319662-26415613 | protein_coding | ||
|
ENST00000507561 (RBPJ-007)
|
26321602-26431183 | protein_coding | ||
|
ENST00000507574 (RBPJ-015)
|
26322209-26424383 | protein_coding | ||
|
ENST00000509158 (RBPJ-013)
|
26320807-26406265 | protein_coding | ||
|
ENST00000510725 (RBPJ-027)
|
26428613-26430195 | retained_intron | ||
|
ENST00000510778 (RBPJ-029)
|
26272607-26424426 | protein_coding | ||
|
ENST00000511401 (RBPJ-022)
|
26321014-26415640 | processed_transcript | ||
|
ENST00000511451 (RBPJ-021)
|
26362476-26420838 | retained_intron | ||
|
ENST00000511546 (RBPJ-018)
|
26359691-26420553 | protein_coding | ||
|
ENST00000512351 (RBPJ-004)
|
26163455-26415605 | protein_coding | ||
|
ENST00000512671 (RBPJ-005)
|
26319686-26420725 | protein_coding | ||
|
ENST00000513182 (RBPJ-024)
|
26321007-26415583 | nonsense_mediated_decay | ||
|
ENST00000514380 (RBPJ-009)
|
26320725-26430457 | retained_intron | ||
|
ENST00000514656 (RBPJ-019)
|
26362446-26368145 | processed_transcript | ||
|
ENST00000514675 (RBPJ-016)
|
26322870-26420563 | protein_coding | ||
|
ENST00000514730 (RBPJ-014)
|
26322164-26420571 | protein_coding | ||
|
ENST00000514807 (RBPJ-012)
|
26320787-26406263 | protein_coding | ||
|
ENST00000515023 (RBPJ-023)
|
26321020-26415640 | processed_transcript | ||
|
ENST00000515573 (RBPJ-017)
|
26343140-26424479 | protein_coding | ||
|
ENSG00000248452 (RP11-324H7.1) |
ENST00000511272 (RP11-324H7.1-001)
|
26111865-26113839 | processed_pseudogene | |
|
ENSG00000250317 (SMIM20) small integral membrane protein 20 |
ENST00000506197 (SMIM20-001)
|
25914204-25929812 | protein_coding | |
|
ENST00000514384 (SMIM20-002)
|
25914309-25929813 | protein_coding | ||
|
ENST00000515764 (SMIM20-003)
|
25861830-25929545 | processed_transcript | ||
|
ENST00000522137 (SMIM20-004)
|
25928215-25929425 | processed_transcript | ||
|
ENST00000614775 (SMIM20-201)
|
25913906-25929874 | protein_coding | ||
|
ENSG00000251009 (RP13-494C23.1) |
ENST00000503085 (RP13-494C23.1-001)
|
25864881-25869550 | lincRNA | |
| CIL_000343_0003 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000061461-ENSMUSG00000039191 | CGP | 10090 | 5:53267106-53657445 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000039191 (Rbpj) recombination signal binding protein for immunoglobulin kappa J region |
ENSMUST00000037618 (Rbpj-201)
|
53590215-53657445 | protein_coding | |
|
ENSMUST00000087360 (Rbpj-202)
|
53555779-53657445 | protein_coding | ||
|
ENSMUST00000113865 (Rbpj-203)
|
53590574-53657445 | protein_coding | ||
|
ENSMUSG00000061461 (Smim20) small integral membrane protein 20 |
ENSMUST00000121042 (Smim20-001)
|
53267106-53283510 | protein_coding | |
|
ENSMUST00000136866 (Smim20-003)
|
53267106-53278487 | nonsense_mediated_decay | ||
|
ENSMUST00000137185 (Smim20-004)
|
53267120-53268567 | retained_intron | ||
|
ENSMUST00000147148 (Smim20-002)
|
53267178-53278539 | nonsense_mediated_decay | ||
|
ENSMUST00000154268 (Smim20-005)
|
53277118-53278015 | retained_intron | ||
|
ENSMUSG00000077696 (n-R5s172) nuclear encoded rRNA 5S 172 |
ENSMUST00000104508 (n-R5s172-201)
|
53346259-53346372 | rRNA | |
Expression Patterns
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