C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000517617 PREX2-003 ENSG00000046889 9606 + 8:67952489-68111089 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLungENST00000517617
Transcript ID Heart Kidney Lung
ENST00000517617 0.577±0.00 0.184±0.00 1.046±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005BU CIL_0005BU_0002 CGP 8:67422125-68237030
CIL_00087Z CIL_00087Z_0001 VISTA 8:67680490-68283275
CIL_0001SD CIL_0001SD_0002 CGP 8:67952118-68819022

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027056 Prex2-001 protein_coding Mus_musculus 0 3240
ENSMUST00000189822 Prex2-003 retained_intron Mus_musculus 0 1565
ENSMUST00000187694 Prex2-004 retained_intron Mus_musculus 0 747

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