C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000517662 RP11-730G20.2-001 ENSG00000253341 9606 - 8:74603244-74604244 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000517662
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000517662 0.109±0.00 0.082±0.00 0.136±0.00 0.170±0.03 0.288±0.00 0.093±0.00 0.060±0.00 0.068±0.00 0.088±0.00 0.095±0.00 0.085±0.00 0.056±0.04 0.123±0.04 0.123±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00008K CIL_00008K_0002 CGP 8:74321130-74855029

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108838 Pcbp2-203 protein_coding Mus_musculus 0 1044
ENSMUST00000078404 Pcbp2-202 protein_coding Mus_musculus 0 861
ENSMUST00000077037 Pcbp2-201 protein_coding Mus_musculus 0 861
ENSMUST00000119050 Gm12186-001 processed_pseudogene Mus_musculus 0 754
ENSDART00000025885 pcbp2-001 protein_coding Danio_rerio 0 518
ENSDART00000131317 pcbp2-004 protein_coding Danio_rerio 0 246
ENSDART00000044386 protein_coding Danio_rerio 0 244

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