C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: CCR4-NOT transcription complex, subunit 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000518021 CNOT7-005 ENSG00000198791 9606 - 8:17242994-17246857 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001VB CIL_0001VB_0001 CGP 8:17156029-17246878
CIL_0001T6 CIL_0001T6_0001 CGP 8:17224964-17302427

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034012 Cnot7-001 protein_coding Mus_musculus 0 479
ENSMUST00000146280 Cnot7-002 processed_transcript Mus_musculus 0 475
ENSMUST00000135269 Cnot7-003 protein_coding Mus_musculus 0 475
ENSMUST00000144970 Cnot7-004 retained_intron Mus_musculus 0 475
ENSMUST00000149992 Cnot7-005 protein_coding Mus_musculus 0 296
ENSMUST00000132032 Cnot7-006 protein_coding Mus_musculus 0 294
ENSMUST00000132740 Cnot7-011 retained_intron Mus_musculus 0 283
ENSMUST00000128237 Cnot7-007 processed_transcript Mus_musculus 0 279
ENSMUST00000128166 Zdhhc2-003 protein_coding Mus_musculus 0 204
ENSMUST00000164934 Zdhhc2-004 processed_transcript Mus_musculus 0 200
ENSMUST00000132200 Cnot7-010 processed_transcript Mus_musculus 1.96182e-44 183
ENSMUST00000139558 Cnot7-008 processed_transcript Mus_musculus 2e-33 147

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