| Transcript ID | Ovary | Placenta |
|---|---|---|
| ENSMUST00000135269 | 7.220±0.00 | 3.617±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | CCR4-NOT transcription complex, subunit 7 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000135269  |
Cnot7-003 |
ENSMUSG00000031601 |
10090 | - |
8:40492547-40511718  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000454 | CIL_000454_0002 | CGP | 8:40307458-40510268 |
| CIL_0001VB | CIL_0001VB_0002 | CGP | 8:40423815-40515847 |
| CIL_0001T6 | CIL_0001T6_0002 | CGP | 8:40492540-40551134 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000289 | IMP | nuclear-transcribed mRNA poly(A) tail shortening |
| GO:0000290 | IGI | deadenylation-dependent decapping of nuclear-transcribed mRNA |
| GO:0000932 | IDA | cytoplasmic mRNA processing body |
| GO:0003676 | IEA | nucleic acid binding |
| GO:0004535 | IMP | poly(A)-specific ribonuclease activity |
| GO:0005515 | IPI | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0005737 | IDA | cytoplasm |
| GO:0030014 | IPI | CCR4-NOT complex |
| GO:0033962 | IGI | cytoplasmic mRNA processing body assembly |
| GO:0045944 | IDA | positive regulation of transcription from RNA polymerase II promoter |
| GO:0090503 | IMP | RNA phosphodiester bond hydrolysis, exonucleolytic |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000361272
|
CNOT7-001 | protein_coding | Homo_sapiens | 0 | 1339 |
|
ENST00000429006
|
CNOT7P1-001 | processed_pseudogene | Homo_sapiens | 0 | 893 |
|
ENST00000508720
|
RP11-584P21.4-001 | processed_pseudogene | Homo_sapiens | 0 | 425 |
|
ENST00000518021
|
CNOT7-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 475 |
|
ENST00000518541
|
CNOT7-012 | protein_coding | Homo_sapiens | 0 | 494 |
|
ENST00000518885
|
CNOT7-009 | processed_transcript | Homo_sapiens | 0 | 292 |
|
ENST00000519918
|
CNOT7-011 | protein_coding | Homo_sapiens | 0 | 835 |
|
ENST00000519954
|
CNOT7-006 | nonsense_mediated_decay | Homo_sapiens | 0 | 743 |
|
ENST00000519998
|
CNOT7-003 | retained_intron | Homo_sapiens | 0 | 315 |
|
ENST00000520178
|
CNOT7-008 | protein_coding | Homo_sapiens | 0 | 302 |
|
ENST00000522062
|
CNOT7-010 | retained_intron | Homo_sapiens | 0 | 316 |
|
ENST00000523649
|
CNOT7-004 | retained_intron | Homo_sapiens | 0 | 475 |
|
ENST00000523917
|
CNOT7-002 | protein_coding | Homo_sapiens | 0 | 1216 |
|
ENST00000524358
|
CNOT7-007 | protein_coding | Homo_sapiens | 0 | 778 |
