C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | transcription elongation factor A (SII), 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000518310  |
TCEA1-009 |
ENSG00000187735 |
9606 | - |
8:53993657-54022314  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008TN | CIL_0008TN_0001 | VISTA | 8:53576629-54178623 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | IEA | DNA binding |
| GO:0005634 | IEA | nucleus |
| GO:0006351 | IEA | transcription, DNA-templated |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000117942
|
Tcea1-ps1-001 | processed_pseudogene | Mus_musculus | 0 | 248 |
|
ENSMUST00000165720
|
Tcea1-002 | protein_coding | Mus_musculus | 0 | 243 |
|
ENSMUST00000081551
|
Tcea1-001 | protein_coding | Mus_musculus | 0 | 243 |
|
ENSMUST00000155020
|
Lypla1-005 | nonsense_mediated_decay | Mus_musculus | 1e-39 | 167 |
|
ENSMUST00000120989
|
Gm15223-001 | processed_pseudogene | Mus_musculus | 0.000000000008 | 75 |
