C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protease, serine 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000519236 TMPRSS4-002 ENSG00000137648 9606 + 11:118077071-118118450 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLungOvaryPlacentaENST00000519236
Transcript ID Breast Colon Lung Ovary Placenta
ENST00000519236 2.726±0.00 5.384±0.00 2.126±0.00 15.475±14.87 0.183±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002BW CIL_0002BW_0002 CGP 11:118077012-118152888

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004252 IEA serine-type endopeptidase activity
GO:0005044 IEA scavenger receptor activity
GO:0005515 IEA protein binding
GO:0006508 IEA proteolysis
GO:0006898 IEA receptor-mediated endocytosis
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000165263 Tmprss4-004 nonsense_mediated_decay Mus_musculus 0 1009
ENSMUST00000034599 Tmprss4-001 protein_coding Mus_musculus 0 837
ENSMUST00000163237 Tmprss4-003 processed_transcript Mus_musculus 0 756

Loading