C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: N-myc downstream regulated 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000519278 NDRG1-006 ENSG00000104419 9606 - 8:133237176-133256228 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderColonHeartLiverLungMuscleOvaryENST00000519278
Transcript ID Adipose Bladder Colon Heart Liver Lung Muscle Ovary
ENST00000519278 9.657±0.00 10.275±0.00 3.767±0.00 0.674±0.00 7.662±0.00 8.596±0.00 2.038±0.00 5.910±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009D4 CIL_0009D4_0001 VISTA 8:132792656-133394938
CIL_0006FT CIL_0006FT_0002 CGP 8:133191039-133302022
CIL_00094T CIL_00094T_0001 VISTA 8:133226403-133828417
CIL_0004PW CIL_0004PW_0001 CGP 8:133237171-133571940

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000005256 Ndrg1-001 protein_coding Mus_musculus 0 717
ENSMUST00000165966 Ndrg1-007 retained_intron Mus_musculus 0 348

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