C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0004PW_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000104419-ENSG00000008513 | CGP | 9606 | 8:133237171-133571940  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000008513  (ST3GAL1)ST3 beta-galactoside alpha-2,3-sialyltransferase 1 |
ENST00000399640 (ST3GAL1-201)
|
133454848-133571940 | protein_coding | |
|
ENST00000517668 (ST3GAL1-005)
|
133464931-133571925 | protein_coding | ||
|
ENST00000518298 (ST3GAL1-002)
|
133476029-133571888 | processed_transcript | ||
|
ENST00000519435 (ST3GAL1-006)
|
133476029-133570379 | processed_transcript | ||
|
ENST00000519924 (ST3GAL1-010)
|
133475877-133489700 | protein_coding | ||
|
ENST00000520020 (ST3GAL1-007)
|
133476143-133499421 | processed_transcript | ||
|
ENST00000521180 (ST3GAL1-001)
|
133454853-133571925 | protein_coding | ||
|
ENST00000521627 (ST3GAL1-014)
|
133488082-133489633 | processed_transcript | ||
|
ENST00000522204 (ST3GAL1-012)
|
133465642-133475934 | retained_intron | ||
|
ENST00000522285 (ST3GAL1-004)
|
133566982-133571746 | processed_transcript | ||
|
ENST00000522652 (ST3GAL1-003)
|
133458945-133571849 | protein_coding | ||
|
ENST00000522873 (ST3GAL1-013)
|
133476523-133571926 | processed_transcript | ||
|
ENST00000523634 (ST3GAL1-011)
|
133475809-133489640 | protein_coding | ||
|
ENST00000523854 (ST3GAL1-008)
|
133464778-133499383 | protein_coding | ||
|
ENST00000523855 (ST3GAL1-009)
|
133475884-133499361 | protein_coding | ||
|
ENSG00000104419 (NDRG1) N-myc downstream regulated 1 |
ENST00000323851 (NDRG1-002)
|
133237171-133297237 | protein_coding | |
|
ENST00000414097 (NDRG1-001)
|
133237176-133297586 | protein_coding | ||
|
ENST00000517331 (NDRG1-023)
|
133244380-133259446 | processed_transcript | ||
|
ENST00000517599 (NDRG1-005)
|
133237176-133297252 | nonsense_mediated_decay | ||
|
ENST00000517745 (NDRG1-024)
|
133258996-133264581 | retained_intron | ||
|
ENST00000518010 (NDRG1-025)
|
133256809-133297252 | processed_transcript | ||
|
ENST00000518066 (NDRG1-030)
|
133238767-133297252 | protein_coding | ||
|
ENST00000518094 (NDRG1-022)
|
133259095-133262257 | retained_intron | ||
|
ENST00000518176 (NDRG1-003)
|
133238538-133297237 | protein_coding | ||
|
ENST00000518480 (NDRG1-017)
|
133256816-133297256 | protein_coding | ||
|
ENST00000519228 (NDRG1-012)
|
133256819-133297958 | protein_coding | ||
|
ENST00000519278 (NDRG1-006)
|
133237176-133256228 | retained_intron | ||
|
ENST00000519580 (NDRG1-014)
|
133256840-133296555 | protein_coding | ||
|
ENST00000520230 (NDRG1-010)
|
133256785-133302022 | protein_coding | ||
|
ENST00000520943 (NDRG1-011)
|
133258379-133298458 | protein_coding | ||
|
ENST00000521026 (NDRG1-008)
|
133237176-133244503 | retained_intron | ||
|
ENST00000521414 (NDRG1-007)
|
133237176-133249488 | processed_transcript | ||
|
ENST00000521438 (NDRG1-009)
|
133237176-133241527 | retained_intron | ||
|
ENST00000521544 (NDRG1-016)
|
133258416-133297252 | protein_coding | ||
|
ENST00000521664 (NDRG1-027)
|
133246627-133254882 | retained_intron | ||
|
ENST00000522377 (NDRG1-026)
|
133246623-133297239 | nonsense_mediated_decay | ||
|
ENST00000522476 (NDRG1-004)
|
133238698-133297252 | protein_coding | ||
|
ENST00000522665 (NDRG1-029)
|
133241878-133250460 | retained_intron | ||
|
ENST00000522738 (NDRG1-015)
|
133259218-133296536 | protein_coding | ||
|
ENST00000522890 (NDRG1-013)
|
133256840-133297092 | protein_coding | ||
|
ENST00000523642 (NDRG1-028)
|
133241874-133244660 | retained_intron | ||
|
ENST00000523892 (NDRG1-020)
|
133262047-133297256 | protein_coding | ||
|
ENST00000523931 (NDRG1-021)
|
133262060-133264992 | retained_intron | ||
|
ENST00000537882 (NDRG1-201)
|
133237171-133297304 | protein_coding | ||
|
ENSG00000225259 (ST13P6) suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) pseudogene 6 |
ENST00000522430 (ST13P6-001)
|
133408006-133409107 | processed_pseudogene | |
|
ENSG00000243537 (CTC-458A3.1) |
ENST00000479066 (CTC-458A3.1-001)
|
133325997-133326404 | processed_pseudogene | |
| CIL_0004PW_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000005125-ENSMUSG00000013846 | CGP | 10090 | 15:66929321-67113992 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000005125 (Ndrg1) N-myc downstream regulated gene 1 |
ENSMUST00000005256 (Ndrg1-001)
|
66929321-66969640 | protein_coding | |
|
ENSMUST00000163496 (Ndrg1-010)
|
66943136-66967940 | protein_coding | ||
|
ENSMUST00000164070 (Ndrg1-006)
|
66946537-66969640 | protein_coding | ||
|
ENSMUST00000164675 (Ndrg1-004)
|
66942012-66969639 | nonsense_mediated_decay | ||
|
ENSMUST00000165966 (Ndrg1-007)
|
66930866-66934469 | retained_intron | ||
|
ENSMUST00000166420 (Ndrg1-009)
|
66931077-66969639 | protein_coding | ||
|
ENSMUST00000167817 (Ndrg1-013)
|
66943079-66948479 | protein_coding | ||
|
ENSMUST00000168542 (Ndrg1-008)
|
66943074-66969639 | nonsense_mediated_decay | ||
|
ENSMUST00000168979 (Ndrg1-003)
|
66943079-66967925 | protein_coding | ||
|
ENSMUST00000170903 (Ndrg1-011)
|
66943129-66969616 | protein_coding | ||
|
ENSMUST00000171266 (Ndrg1-005)
|
66943097-66969595 | nonsense_mediated_decay | ||
|
ENSMUST00000171569 (Ndrg1-002)
|
66934158-66969639 | retained_intron | ||
|
ENSMUST00000172447 (Ndrg1-012)
|
66943092-66969616 | nonsense_mediated_decay | ||
|
ENSMUSG00000013846 (St3gal1) ST3 beta-galactoside alpha-2,3-sialyltransferase 1 |
ENSMUST00000092640 (St3gal1-201)
|
67102875-67113992 | protein_coding | |
|
ENSMUSG00000091479 (Gm17035) predicted gene 17035 |
ENSMUST00000170557 (Gm17035-001)
|
66929607-66931107 | antisense | |
Expression Patterns
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