C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000430774} | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000519718  |
CTD-2410N18.5-001 |
ENSG00000272772 |
9606 | - |
5:134167170-134226071  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0000GN | CIL_0000GN_0002 | CGP | 5:134114711-134177038 |
| CIL_00089W | CIL_00089W_0001 | VISTA | 5:134136326-134739629 |
| CIL_00062V | CIL_00062V_0002 | CGP | 5:134167170-134226142 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0006511 | IEA | ubiquitin-dependent protein catabolic process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000020608
|
Ppp2ca-001 | protein_coding | Mus_musculus | 0 | 364 |
|
ENSMUST00000109072
|
Skp1a-002 | protein_coding | Mus_musculus | 0 | 248 |
|
ENSMUST00000166537
|
Skp1a-006 | protein_coding | Mus_musculus | 0 | 244 |
|
ENSMUST00000037324
|
Skp1a-001 | protein_coding | Mus_musculus | 0 | 244 |
|
ENSMUST00000093121
|
Skp1a-003 | retained_intron | Mus_musculus | 4e-34 | 148 |
|
ENSMUST00000147684
|
Skp1a-004 | nonsense_mediated_decay | Mus_musculus | 1e-33 | 147 |
|
ENSMUST00000119054
|
Gm12988-001 | processed_pseudogene | Mus_musculus | 4e-29 | 132 |
|
ENSMUST00000116595
|
Skp1a-005 | nonsense_mediated_decay | Mus_musculus | 8e-21 | 104 |
|
ENSDART00000075443
|
PPP2CA-201 | protein_coding | Danio_rerio | 1e-18 | 97 |
|
ENSDART00000151106
|
PPP2CA-001 | protein_coding | Danio_rerio | 1e-18 | 97 |
