C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DENN/MADD domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000519811 DENND3-001 ENSG00000105339 9606 + 8:141128638-141195808 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartLungMuscleOvaryPlacentaENST00000519811
Transcript ID Adipose Brain Breast Colon Heart Lung Muscle Ovary Placenta
ENST00000519811 2.543±0.00 1.581±0.00 1.208±0.00 1.628±1.07 2.014±0.00 4.568±1.48 0.461±0.00 1.015±0.12 1.784±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006FQ CIL_0006FQ_0002 CGP 8:140657900-141195808
CIL_0007WG CIL_0007WG_0001 VISTA 8:141111247-141716252
CIL_0000X9 CIL_0000X9_0002 CGP 8:141117278-141308305

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008333 ISS endosome to lysosome transport
GO:0017112 IDA Rab guanyl-nucleotide exchange factor activity
GO:0032851 IDA positive regulation of Rab GTPase activity
GO:0044257 ISS cellular protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000043414 Dennd3-001 protein_coding Mus_musculus 0 2569
ENSMUST00000173292 Dennd3-008 nonsense_mediated_decay Mus_musculus 0 2374
ENSMUST00000162488 Dennd3-002 protein_coding Mus_musculus 0 1572

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