C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000520201 IKBKB-009 ENSG00000104365 9606 + 8:42271389-42332455 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryTestisENST00000520201
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENST00000520201 1.147±0.00 5.260±0.00 0.597±0.12 1.272±0.00 0.772±0.00 0.680±0.00 1.441±0.00 0.968±0.09 2.034±0.00 2.805±0.33 1.434±0.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007IG CIL_0007IG_0002 CGP 8:42175233-42332653

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000063401 Ikbkb-011 protein_coding Mus_musculus 0 1631
ENSMUST00000033939 Ikbkb-001 protein_coding Mus_musculus 0 1631
ENSMUST00000125314 Ikbkb-002 nonsense_mediated_decay Mus_musculus 0 1604
ENSMUST00000135326 Ikbkb-003 nonsense_mediated_decay Mus_musculus 0 1604
ENSMUST00000146212 Ikbkb-010 retained_intron Mus_musculus 0 1277
ENSMUST00000150259 Ikbkb-009 retained_intron Mus_musculus 0 660
ENSMUST00000144583 Ikbkb-008 retained_intron Mus_musculus 0 473
ENSMUST00000131767 Ikbkb-014 protein_coding Mus_musculus 0 309
ENSMUST00000144895 Ikbkb-007 retained_intron Mus_musculus 0 243
ENSMUST00000126439 Ikbkb-006 retained_intron Mus_musculus 4e-38 165

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