C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 200B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000521452 TMEM200B-001 ENSG00000253304 9606 - 1:29119428-29123935 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverMuscleOvaryTestisENST00000521452
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Muscle Ovary Testis
ENST00000521452 10.536±0.00 9.575±0.00 1.687±0.72 7.283±3.83 11.448±0.00 7.450±0.00 4.348±0.73 3.736±0.00 22.329±11.93 20.799±7.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099N CIL_00099N_0001 VISTA 1:28583201-29186892
CIL_0003PY CIL_0003PY_0002 CGP 1:29119428-29181987

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094666 Tmem200b-201 protein_coding Mus_musculus 0 547
ENSMUST00000155990 Epb4.1-015 protein_coding Mus_musculus 0 209
ENSMUST00000151746 Epb4.1-011 processed_transcript Mus_musculus 0 209
ENSMUST00000146443 Epb4.1-014 protein_coding Mus_musculus 0 209
ENSMUST00000135579 Epb4.1-009 protein_coding Mus_musculus 0 209
ENSMUST00000137846 Epb4.1-010 protein_coding Mus_musculus 0 209
ENSMUST00000054917 Epb4.1-007 protein_coding Mus_musculus 0 209
ENSMUST00000105974 Epb4.1-005 protein_coding Mus_musculus 0 209
ENSMUST00000105970 Epb4.1-003 protein_coding Mus_musculus 0 209
ENSMUST00000105975 Epb4.1-008 protein_coding Mus_musculus 0 209
ENSMUST00000146021 Epb4.1-004 processed_transcript Mus_musculus 0 209
ENSMUST00000105981 Epb4.1-203 protein_coding Mus_musculus 0 209
ENSMUST00000084253 Epb4.1-202 protein_coding Mus_musculus 0 209
ENSMUST00000030739 Epb4.1-201 protein_coding Mus_musculus 0 209

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