C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: matrilin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000521689 MATN2-001 ENSG00000132561 9606 + 8:97868840-98035978 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartLiverMuscleOvaryPlacentaENST00000521689
Transcript ID Adipose Brain Breast Colon Heart Liver Muscle Ovary Placenta
ENST00000521689 4.802±0.00 1.214±0.66 4.428±0.52 2.631±0.52 1.884±0.38 6.964±0.00 0.562±0.07 13.223±8.70 6.595±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001KV CIL_0001KV_0001 CGP 8:97775057-98036716

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005509 IEA calcium ion binding
GO:0005515 IPI:IEA protein binding
GO:0005578 NAS proteinaceous extracellular matrix
GO:0008150 ND biological_process
GO:0031012 IDA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022947 Matn2-201 protein_coding Mus_musculus 0 3064
ENSMUST00000163455 Matn2-202 protein_coding Mus_musculus 0 2756

Loading